1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00010p00237800

AMTR_s00010p00237800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.291

No description available


Gene families : OG0000406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00237800

Target Alias Description ECC score Gene Family Method Actions
AT2G19710 No alias Regulator of Vps4 activity in the MVB pathway protein 0.03 OrthoFinder output from all 47 species
Adi_g054726 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Ala_g26690 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Als_g23932 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Aob_g01929 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Aop_g39082 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Azfi_s0124.g048464 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Cba_g15528 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.04 OrthoFinder output from all 47 species
Ceric.04G112400.1 Ceric.04G112400 regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Ceric.13G083400.1 Ceric.13G083400 regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Dcu_g08845 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Dde_g08464 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Ehy_g17644 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.04 OrthoFinder output from all 47 species
Ehy_g29519 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
GSVIVT01005850001 No alias Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
GSVIVT01011918001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01015242001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_01950 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g40975 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Len_g58366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59871 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Lfl_g01766 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
MA_108366g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g28435 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Pir_g65448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g072560.3.1 Solyc04g072560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g07646 No alias regulatory protein *(ISTL) of ESCRT-mediated sorTing &... 0.03 OrthoFinder output from all 47 species
Zm00001e005428_P001 Zm00001e005428 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020126_P002 Zm00001e020126 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005061 Ist1 1 142
No external refs found!