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  5. AMTR_s00010p00235760

AMTR_s00010p00235760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.281

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00235760
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00036100 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
Aev_g19152 No alias mTERF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g24645 PTAC15 mTERF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Als_g18494 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12846 No alias mTERF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g14738 No alias mTERF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g18393 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02967 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48743 PTAC15 mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10992 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12390 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13389 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012810001 No alias RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.01 OrthoFinder output from all 47 species
Gb_15878 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g24090.1 LOC_Os07g24090 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
LOC_Os11g14130.1 LOC_Os11g14130 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
MA_31885g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_493420g0010 No alias transcription factor (mTERF) 0.01 OrthoFinder output from all 47 species
Ore_g35894 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09613 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo419725 No alias RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
Smo77318 EMB93, SOLDAT10 RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
Solyc04g072500.1.1 Solyc04g072500 transcription factor (mTERF) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 130 307
IPR003690 MTERF 34 216
No external refs found!