1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00010p00235420

AMTR_s00010p00235420 (EMB93, SOLDAT10,...)


Aliases : EMB93, SOLDAT10, evm_27.TU.AmTr_v1.0_scaffold00010.280

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00235420

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00036130 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
AMTR_s00126p00036170 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
AMTR_s01293p00010460 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G62010 No alias Mitochondrial transcription termination factor family protein 0.04 OrthoFinder output from all 47 species
Aev_g02436 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49279 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08791 EMB2219 mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12578 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26943 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01911 EMB93, SOLDAT10 mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12846 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14738 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G017100.1 Ceric.20G017100 mTERF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.30G015700.1 Ceric.30G015700 mTERF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g09151 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22736 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24025 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10992 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12390 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06040 EMB2219 mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14645 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009012001 No alias RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
Gb_12368 No alias transcription factor (mTERF) 0.05 OrthoFinder output from all 47 species
Gb_26175 No alias transcription factor (mTERF) 0.06 OrthoFinder output from all 47 species
Gb_26176 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g12080.1 LOC_Os06g12080 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
MA_3151g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_493420g0010 No alias transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
MA_86824g0010 No alias transcription factor (mTERF) 0.05 OrthoFinder output from all 47 species
Msp_g31586 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012547 No alias mTERF-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Sam_g24968 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo77318 EMB93, SOLDAT10 RNA biosynthesis.organelle... 0.07 OrthoFinder output from all 47 species
Solyc04g051880.3.1 Solyc04g051880 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Solyc04g072500.1.1 Solyc04g072500 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Solyc04g072520.3.1 Solyc04g072520 transcription factor (mTERF) 0.05 OrthoFinder output from all 47 species
Solyc04g072540.3.1 Solyc04g072540 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
Zm00001e027097_P001 Zm00001e027097 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 194 376
IPR003690 MTERF 103 300
No external refs found!