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  5. AMTR_s00010p00201890

AMTR_s00010p00201890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.193

Description : Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.hydroxyacyl-ACP dehydratase (ptHD)


Gene families : OG0004877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00201890
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT2G22230 No alias Thioesterase superfamily protein 0.1 OrthoFinder output from all 47 species
AT5G10160 No alias Thioesterase superfamily protein 0.1 OrthoFinder output from all 47 species
Aop_g09110 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0090.g042684 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original... 0.02 OrthoFinder output from all 47 species
Ceric.28G048200.1 Ceric.28G048200 hydroxyacyl-ACP dehydratase *(ptHD)) & original... 0.09 OrthoFinder output from all 47 species
Cre03.g208050 No alias Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.02 OrthoFinder output from all 47 species
Dde_g00398 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01029788001 No alias Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.04 OrthoFinder output from all 47 species
LOC_Os08g12840.1 LOC_Os08g12840 hydroxyacyl-ACP dehydratase (ptHD) 0.06 OrthoFinder output from all 47 species
Len_g13375 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g04910.1 No alias hydroxyacyl-ACP dehydratase (ptHD) 0.05 OrthoFinder output from all 47 species
Ore_g17356 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c14_8480V3.1 Pp3c14_8480 Thioesterase superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c24_9920V3.1 Pp3c24_9920 Thioesterase superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g04951 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g105060.3.1 Solyc01g105060 hydroxyacyl-ACP dehydratase (ptHD) 0.07 OrthoFinder output from all 47 species
Zm00001e021571_P001 Zm00001e021571 hydroxyacyl-ACP dehydratase (ptHD) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
MF GO:0003913 DNA photolyase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013114 FabA_FabZ 104 229
No external refs found!