1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00010p00131910

AMTR_s00010p00131910 (PLA2-ALPHA,...)


Aliases : PLA2-ALPHA, ATSPLA2-ALPHA, evm_27.TU.AmTr_v1.0_scaffold00010.89

Description : Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A2 activities.sPLA2-type phospholipase A2


Gene families : OG0001592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001592_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00131910
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Adi_g013264 PLA2-ALPHA, ATSPLA2-ALPHA phospholipase-A2 *(sPLA2)) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27470 PLA2-ALPHA, ATSPLA2-ALPHA phospholipase-A2 *(sPLA2)) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24445 PLA2-ALPHA, ATSPLA2-ALPHA phospholipase-A2 *(sPLA2)) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02682 PLA2-ALPHA, ATSPLA2-ALPHA phospholipase-A2 *(sPLA2)) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g08220 PLA2-ALPHA, ATSPLA2-ALPHA phospholipase-A2 *(sPLA2)) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g01897 PLA2-ALPHA, ATSPLA2-ALPHA phospholipase-A2 *(sPLA2)) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010913001 PLA2-ALPHA, ATSPLA2-ALPHA Lipid metabolism.lipid degradation.phospholipase... 0.03 OrthoFinder output from all 47 species
Mp5g02710.1 PLA2-ALPHA, ATSPLA2-ALPHA phospholipase A2 (sPLA2) 0.02 OrthoFinder output from all 47 species
Pir_g19990 PLA2-ALPHA, ATSPLA2-ALPHA phospholipase-A2 *(sPLA2)) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001120_P003 PLA2-ALPHA,... phospholipase A2 (sPLA2) 0.02 OrthoFinder output from all 47 species
Zm00001e024178_P001 PLA2-ALPHA,... phospholipase A2 (sPLA2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004794 L-threonine ammonia-lyase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006549 isoleucine metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009097 isoleucine biosynthetic process IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016841 ammonia-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!