AMTR_s00009p00256630 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.289

Description : Polyadenylate-binding protein 8 OS=Arabidopsis thaliana

Gene families : OG0005880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005880_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00009p00256630

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000893.5	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dcu_g40735	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g10771	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g10400	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g14275	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g26392	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	553	621
IPR000504	RRM_dom	330	391
IPR000504	RRM_dom	450	524
IPR000504	RRM_dom	134	203

External Links

No external refs found!