AMTR_s00008p00218750 (MCM9,...)

Aliases : MCM9, evm_27.TU.AmTr_v1.0_scaffold00008.136

Description : Cell cycle.interphase.DNA replication.initiation.MCM8-9 auxiliary complex.MCM9 component

Gene families : OG0001056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00008p00218750

Target	Alias	Description	ECC score	Gene Family Method
Ala_g24409	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Ala_g28206	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Als_g11754	MCM4	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g09863	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Aop_g23244	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Aspi01Gene22827.t1	MCM4, Aspi01Gene22827	component *(MCM4) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Aspi01Gene25633.t1	MCM4, Aspi01Gene25633	component *(MCM4) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Aspi01Gene25932.t1	MCM7, PRL,...	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Azfi_s0206.g057809	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Azfi_s0544.g076399	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Cba_g13812	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Ceric.04G002100.1	MCM7, PRL,...	component *(MCM7) of MCM replicative DNA helicase...	0.05	OrthoFinder output from all 47 species
Ceric.10G009500.1	MCM4, Ceric.10G009500	component *(MCM4) of MCM replicative DNA helicase...	0.04	OrthoFinder output from all 47 species
Cre07.g316850	MCM4	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.03	OrthoFinder output from all 47 species
Cre10.g455850	MCM7, PRL	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.02	OrthoFinder output from all 47 species
Dac_g14939	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Dcu_g05722	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Dcu_g40402	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
GSVIVT01024207001	MCM4	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.08	OrthoFinder output from all 47 species
GSVIVT01028118001	MCM7, PRL	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.07	OrthoFinder output from all 47 species
Gb_09191	MCM4	component MCM4 of MCM replicative DNA helicase complex	0.05	OrthoFinder output from all 47 species
Gb_35205	MCM7, PRL	component MCM7 of MCM replicative DNA helicase complex	0.04	OrthoFinder output from all 47 species
Gb_36024	MCM4	component MCM4 of MCM replicative DNA helicase complex	0.04	OrthoFinder output from all 47 species
LOC_Os01g36390.1	MCM4, LOC_Os01g36390	component MCM4 of MCM replicative DNA helicase complex	0.03	OrthoFinder output from all 47 species
LOC_Os12g37400.1	MCM7, PRL, LOC_Os12g37400	component MCM7 of MCM replicative DNA helicase complex	0.03	OrthoFinder output from all 47 species
Len_g00736	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Len_g11914	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
MA_10426237g0010	MCM7, PRL	component MCM7 of MCM replicative DNA helicase complex	0.06	OrthoFinder output from all 47 species
MA_10434231g0010	MCM4	DNA replication licensing factor MCM4 OS=Oryza sativa...	0.07	OrthoFinder output from all 47 species
Mp2g02600.1	MCM7, PRL	component MCM7 of MCM replicative DNA helicase complex	0.04	OrthoFinder output from all 47 species
Mp3g02380.1	MCM4	component MCM4 of MCM replicative DNA helicase complex	0.03	OrthoFinder output from all 47 species
Mp4g02430.1	MCM9	component MCM9 of MCM8-9 cell cycle auxiliary complex	0.03	OrthoFinder output from all 47 species
Sam_g09734	No alias	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Sam_g27151	No alias	component *(MCM7) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Solyc01g079500.4.1	MCM7, PRL, Solyc01g079500	component MCM7 of MCM replicative DNA helicase complex	0.08	OrthoFinder output from all 47 species
Solyc01g105520.3.1	MCM9, Solyc01g105520	component MCM9 of MCM8-9 cell cycle auxiliary complex	0.05	OrthoFinder output from all 47 species
Solyc01g110130.3.1	MCM4, Solyc01g110130	component MCM4 of MCM replicative DNA helicase complex	0.06	OrthoFinder output from all 47 species
Spa_g10751	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Spa_g11927	MCM7, PRL	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g11928	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Spa_g43313	MCM7, PRL	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g06082	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Zm00001e002873_P001	MCM7, PRL, Zm00001e002873	component MCM7 of MCM replicative DNA helicase complex	0.07	OrthoFinder output from all 47 species
Zm00001e018214_P001	MCM7, PRL, Zm00001e018214	component MCM7 of MCM replicative DNA helicase complex	0.07	OrthoFinder output from all 47 species
Zm00001e026379_P001	MCM4, Zm00001e026379	component MCM4 of MCM replicative DNA helicase complex	0.06	OrthoFinder output from all 47 species
Zm00001e030823_P001	MCM9, Zm00001e030823	component MCM9 of MCM8-9 cell cycle auxiliary complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003937	IMP cyclohydrolase activity	IEP	HCCA
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
MF	GO:0008276	protein methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
MF	GO:0016278	lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
MF	GO:0018024	histone lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
MF	GO:0019238	cyclohydrolase activity	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
MF	GO:0042054	histone methyltransferase activity	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001208	MCM_dom	254	564

External Links

No external refs found!

AMTR_s00008p00218750 (MCM9,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation