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  5. AMTR_s00007p00244860

AMTR_s00007p00244860 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.261

No description available


Gene families : OG0000610 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000610_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00244860

Target Alias Description ECC score Gene Family Method Actions
Als_g07024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64187.t1 Aspi01Gene64187 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G028500.1 Ceric.20G028500 not classified & original description: pacid=50567652... 0.02 OrthoFinder output from all 47 species
Ceric.32G026400.1 Ceric.32G026400 not classified & original description: pacid=50597555... 0.03 OrthoFinder output from all 47 species
Dac_g33497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29778 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025325 No alias not classified & original description: CDS=1081-2391 0.03 OrthoFinder output from all 47 species
Spa_g25947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02852 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006587_P001 Zm00001e006587 no description available(sp|b4xt64|nal1_orysj : 736.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!