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  5. AMTR_s00007p00232940

AMTR_s00007p00232940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.236

No description available


Gene families : OG0004492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004492_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00232940

Target Alias Description ECC score Gene Family Method Actions
AT5G16210 No alias HEAT repeat-containing protein 0.04 OrthoFinder output from all 47 species
Aev_g08511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51614.t1 Aspi01Gene51614 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G087500.1 Ceric.07G087500 not classified & original description: pacid=50627378... 0.03 OrthoFinder output from all 47 species
Dcu_g18666 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01030979001 No alias No description available 0.05 OrthoFinder output from all 47 species
Lfl_g35911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g00840.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g14707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g31275 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g16001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c18_21850V3.1 Pp3c18_21850 HEAT repeat-containing protein 0.03 OrthoFinder output from all 47 species
Ppi_g17442 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017761 No alias not classified & original description: CDS=318-3770 0.02 OrthoFinder output from all 47 species
Solyc02g086330.4.1 Solyc02g086330 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA

No InterPro domains available for this sequence

No external refs found!