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  5. AMTR_s00007p00186150

AMTR_s00007p00186150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.151

Description : Chromatin organisation.histones.H4-type histone


Gene families : OG0000254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00007p00186150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00256370 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from all 47 species
AT3G46320 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G59690 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010920 No alias histone *(H4) & original description: CDS=1-702 0.04 OrthoFinder output from all 47 species
Azfi_s0056.g034070 No alias histone *(H4) & original description: CDS=83-484 0.03 OrthoFinder output from all 47 species
Dde_g47245 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034208001 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from all 47 species
Pp3c5_600V3.1 Pp3c5_600 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g12063 No alias histone *(H4) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc06g005420.1.1 Solyc06g005420 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc06g075930.1.1 Solyc06g075930 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc11g066160.1.1 Solyc11g066160 histone (H4) 0.04 OrthoFinder output from all 47 species
Zm00001e027269_P001 Zm00001e027269 histone (H4) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 28 94
No external refs found!