1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00007p00177030

AMTR_s00007p00177030 (BAG4, ATBAG4,...)


Aliases : BAG4, ATBAG4, evm_27.TU.AmTr_v1.0_scaffold00007.139

Description : BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana


Gene families : OG0000487 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000487_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00177030

Target Alias Description ECC score Gene Family Method Actions
AT5G14360 No alias Ubiquitin-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G40630 No alias Ubiquitin-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g048188 BAG3, ATBAG3 nucleotide exchange factor *(BAG) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g052032 BAG3, ATBAG3 nucleotide exchange factor *(BAG) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g00395 BAG1, ATBAG1 nucleotide exchange factor *(BAG) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57881.t1 BAG4, ATBAG4,... nucleotide exchange factor *(BAG) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57882.t1 BAG1, ATBAG1,... nucleotide exchange factor *(BAG) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62490.t1 BAG4, ATBAG4,... nucleotide exchange factor *(BAG) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40467 BAG1, ATBAG1 nucleotide exchange factor *(BAG) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02185 BAG4, ATBAG4 nucleotide exchange factor *(BAG) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021575001 BAG3, ATBAG3 BAG family molecular chaperone regulator 2... 0.03 OrthoFinder output from all 47 species
LOC_Os04g52890.1 BAG1, ATBAG1,... nucleotide exchange factor (BAG) 0.04 OrthoFinder output from all 47 species
LOC_Os09g35630.1 BAG1, ATBAG1,... nucleotide exchange factor (BAG) 0.03 OrthoFinder output from all 47 species
Msp_g06846 BAG1, ATBAG1 nucleotide exchange factor *(BAG) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006280 BAG4, ATBAG4 nucleotide exchange factor *(BAG) & original... 0.03 OrthoFinder output from all 47 species
Solyc06g007240.4.1 BAG4, ATBAG4,... nucleotide exchange factor (BAG) 0.02 OrthoFinder output from all 47 species
Solyc06g035720.3.1 BAG1, ATBAG1,... nucleotide exchange factor (BAG) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0051087 chaperone binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003103 BAG_domain 140 215
IPR000626 Ubiquitin-like_dom 53 112
No external refs found!