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  5. AMTR_s00007p00147140

AMTR_s00007p00147140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.107

Description : Endoglucanase 13 OS=Arabidopsis thaliana


Gene families : OG0009895 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009895_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00147140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00122090 evm_27.TU.AmTr_v1... Endoglucanase 17 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00007p00145940 GH9B10,... Endoglucanase 13 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Aspi01Gene43496.t1 GH9B18,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10436665g0010 AtGH9B13, GH9B13 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_8409826g0010 ATCEL2, CEL2 Endoglucanase 17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g38066 AtGH9C1, GH9C1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g45088 AtGH9C1, GH9C1 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 1 88
No external refs found!