AMTR_s00007p00053050 (ABI4, SAN5, SIS5,...)

Aliases : ABI4, SAN5, SIS5, ATABI4, SUN6, ISI3, GIN6, evm_27.TU.AmTr_v1.0_scaffold00007.27

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00007p00053050

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00223240	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AT1G21910	DREB26	Integrase-type DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.02	OrthoFinder output from all 47 species
AT1G77640	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
Adi_g013119	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g015471	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.04	OrthoFinder output from all 47 species
Adi_g016418	RAP2.2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g14106	DEAR2	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene11862.t1	ATERF12, ERF12,...	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Aspi01Gene51269.t1	TINY2, Aspi01Gene51269	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Cba_g18523	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.06	OrthoFinder output from all 47 species
Ceric.24G043100.1	DEAR4, RAP2.10,...	not classified & original description: pacid=50629256...	0.04	OrthoFinder output from all 47 species
Dde_g06699	Rap2.6L	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g47766	RAP2.6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g48050	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g18210	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01013905001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01013913001	ERF104	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
GSVIVT01013916001	ERF104	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	OrthoFinder output from all 47 species
GSVIVT01013917001	ERF104	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
GSVIVT01013918001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01013923001	ERF104	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01013929001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01013931001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01013934001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01036389001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
Gb_01211	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Gb_07992	RAP2.9, DEAR5	Ethylene-responsive transcription factor RAP2-9...	0.02	OrthoFinder output from all 47 species
Gb_12965	ERF110	Ethylene-responsive transcription factor ABR1...	0.02	OrthoFinder output from all 47 species
Gb_19221	DEAR3	Ethylene-responsive transcription factor ERF008...	0.01	OrthoFinder output from all 47 species
Gb_26738	DREB26	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
Gb_26739	DREB26	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
LOC_Os02g43790.1	ERF-1, ATERF-1,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os02g45420.1	LOC_Os02g45420	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
LOC_Os07g42510.1	RAP2.12, LOC_Os07g42510	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g35240.1	LOC_Os08g35240	Ethylene-responsive transcription factor ERF017...	0.03	OrthoFinder output from all 47 species
LOC_Os10g41330.1	ERF-6-6, ERF6,...	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Len_g20664	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Len_g29777	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.01	OrthoFinder output from all 47 species
Pir_g37924	ERF110	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g025993	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0241.g026632	No alias	not classified & original description: CDS=67-2787	0.01	OrthoFinder output from all 47 species
Solyc03g093540.1.1	Solyc03g093540	transcription factor (ERF)	0.08	OrthoFinder output from all 47 species
Solyc03g124110.2.1	DREB1A, ATCBF3,...	transcription factor (DREB). transcription factor (CBF/DREB1)	0.02	OrthoFinder output from all 47 species
Solyc06g082590.1.1	CRF4, Solyc06g082590	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc07g053740.1.1	ATERF4, RAP2.5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc08g078190.2.1	ERF5, ATERF-5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc10g006130.1.1	ATERF3, ERF3,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc10g009110.1.1	ATERF4, RAP2.5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc11g042560.1.1	Solyc11g042560	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e023078_P001	Zm00001e023078	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	85	134

External Links

No external refs found!

AMTR_s00007p00053050 (ABI4, SAN5, SIS5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation