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Description : Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana (sp|o65567|pp342_arath : 878.0)
Gene families : OG_01_0007364 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007364_tree ,
OG_02_0005355 (LandPlants) Phylogenetic Tree(s): OG_02_0005355_tree ,
OG_03_0010911 (SeedPlants) Phylogenetic Tree(s): OG_03_0010911_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os09g25550.1 | |
| Cluster | HCCA: Cluster_47 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00020910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | Archaeplastida | |
| Gb_06104 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | Archaeplastida | |
| MA_10345546g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_157201g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.05 | Archaeplastida | |
| MA_187850g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.05 | Archaeplastida | |
| Mp1g07710.1 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | Archaeplastida | |
| Zm00001e040095_P002 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.07 | Archaeplastida | |
| AMTR_s00065p00020910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | LandPlants | |
| Gb_06104 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.02 | LandPlants | |
| MA_157201g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | LandPlants | |
| MA_187850g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | LandPlants | |
| Mp1g07710.1 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.04 | LandPlants | |
| Zm00001e040095_P002 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.08 | LandPlants | |
| AMTR_s00065p00020910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | SeedPlants | |
| AT4G30825 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | SeedPlants | |
| Gb_06104 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.02 | SeedPlants | |
| MA_187850g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | SeedPlants | |
| Zm00001e040095_P002 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.08 | SeedPlants |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 889 | 936 |
| IPR002885 | Pentatricopeptide_repeat | 823 | 864 |
| IPR002885 | Pentatricopeptide_repeat | 401 | 448 |
| IPR002885 | Pentatricopeptide_repeat | 300 | 329 |
| IPR002885 | Pentatricopeptide_repeat | 753 | 782 |
| IPR002885 | Pentatricopeptide_repeat | 648 | 674 |
| IPR002885 | Pentatricopeptide_repeat | 374 | 398 |
| IPR002885 | Pentatricopeptide_repeat | 613 | 642 |
| IPR002885 | Pentatricopeptide_repeat | 787 | 817 |
| IPR002885 | Pentatricopeptide_repeat | 543 | 566 |
| IPR002885 | Pentatricopeptide_repeat | 719 | 747 |
| IPR002885 | Pentatricopeptide_repeat | 477 | 503 |
| IPR002885 | Pentatricopeptide_repeat | 579 | 604 |
| No external refs found! |