AMTR_s00006p00259220 (HEMB1,...)


Aliases : HEMB1, evm_27.TU.AmTr_v1.0_scaffold00006.214

Description : Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase


Gene families : OG0006175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006175_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00259220

Target Alias Description ECC score Gene Family Method Actions
Adi_g020743 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g07164 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06542 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09956 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27653.t1 HEMB1, Aspi01Gene27653 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0077.g037965 HEMB1 EC_4.2 carbon-oxygen lyase & original description: CDS=83-1387 0.06 OrthoFinder output from all 47 species
Ceric.20G017900.1 HEMB1, Ceric.20G017900 EC_4.2 carbon-oxygen lyase & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001154.8 HEMB1 Coenzyme metabolism.tetrapyrrol... 0.05 OrthoFinder output from all 47 species
Cre02.g091050 HEMB1 Coenzyme metabolism.tetrapyrrol... 0.04 OrthoFinder output from all 47 species
GSVIVT01008851001 HEMB1 Coenzyme metabolism.tetrapyrrol... 0.06 OrthoFinder output from all 47 species
Len_g21693 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07323 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.07 OrthoFinder output from all 47 species
Mp1g22820.1 HEMB1 porphobilinogen synthase 0.07 OrthoFinder output from all 47 species
Ore_g05454 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g04541 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27107 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06304 HEMB1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000572 HEMB1 EC_4.2 carbon-oxygen lyase & original description: CDS=52-1308 0.04 OrthoFinder output from all 47 species
Smo441909 HEMB1 Coenzyme metabolism.tetrapyrrol... 0.02 OrthoFinder output from all 47 species
Solyc08g069030.4.1 HEMB1, Solyc08g069030 porphobilinogen synthase 0.05 OrthoFinder output from all 47 species
Zm00001e013205_P001 HEMB1, Zm00001e013205 porphobilinogen synthase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004655 porphobilinogen synthase activity IEA Interproscan
BP GO:0033014 tetrapyrrole biosynthetic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR001731 ALAD 104 423
No external refs found!