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  5. AMTR_s00006p00257590

AMTR_s00006p00257590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.200

Description : Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0021459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0021459_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00257590
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00219440 MEF22,... Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
AMTR_s01859p00006880 OTP81,... Pentatricopeptide repeat-containing protein At2g29760,... 0.05 OrthoFinder output from all 47 species
Solyc02g072010.3.1 Solyc02g072010 Pentatricopeptide repeat-containing protein At4g18840... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 83 130
IPR002885 Pentatricopeptide_repeat 189 218
No external refs found!