Heatmap: Cluster_59 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00263570 (evm_27.TU.AmTr_v1.0_scaffold00002.480)
-2.1 -0.97 -1.92 -2.21 0.38 -2.79 -3.03 -4.56 -1.5 -1.54 1.52 0.58 0.55 -1.14 -1.23 0.73 1.31 0.89 0.8 0.72 0.53 -0.08
AMTR_s00006p00257590 (evm_27.TU.AmTr_v1.0_scaffold00006.200)
- - - - 0.53 - -2.52 - -3.67 -3.07 1.9 0.56 -0.23 -1.46 -0.57 0.51 1.55 0.74 0.1 0.94 1.73 -0.39
AMTR_s00010p00262270 (evm_27.TU.AmTr_v1.0_scaffold00010.463)
- - - - 0.54 - -2.43 - -2.89 -3.38 1.42 1.15 -0.5 -1.12 -0.64 0.59 1.8 0.37 0.86 0.37 1.54 0.18
AMTR_s00010p00262460 (evm_27.TU.AmTr_v1.0_scaffold00010.468)
0.16 - - - -0.34 - -2.43 - -2.65 -2.5 1.38 1.68 -1.0 -2.28 -1.58 0.12 1.28 -0.51 0.44 0.34 2.33 -0.23
AMTR_s00011p00207910 (evm_27.TU.AmTr_v1.0_scaffold00011.79)
- - - -3.64 -2.7 - -3.43 - -4.12 -3.65 1.29 -2.41 1.01 0.49 -1.17 -5.63 1.84 - - 1.96 2.68 0.22
AMTR_s00016p00256000 (evm_27.TU.AmTr_v1.0_scaffold00016.338)
-3.58 -4.43 - -5.43 -0.9 - -4.06 - -2.9 -3.69 1.45 -1.55 -0.2 0.06 0.03 -0.13 1.34 0.86 0.18 0.52 2.56 0.4
AMTR_s00017p00228030 (evm_27.TU.AmTr_v1.0_scaffold00017.178)
- - - -2.03 0.9 - - - - -2.44 0.61 1.86 -0.43 -3.51 -3.25 - 1.33 0.67 -0.31 -0.8 2.83 0.02
AMTR_s00019p00109830 (evm_27.TU.AmTr_v1.0_scaffold00019.86)
- - - - -0.81 - - - - - 1.45 0.48 0.72 -2.73 0.13 1.5 0.76 0.28 -0.69 0.96 2.45 -0.59
- 0.01 0.37 - -0.74 - -3.01 - - - 1.31 1.6 -2.81 -1.67 -0.03 - -7.24 - 0.83 - 3.32 -2.07
AMTR_s00029p00042600 (evm_27.TU.AmTr_v1.0_scaffold00029.30)
-0.17 - - -3.13 0.65 - -3.9 - -6.03 -4.39 1.71 0.82 0.21 -1.64 0.12 0.67 1.58 -0.22 0.84 0.11 1.01 0.42
- - - - -3.23 - - - -2.21 - 0.36 1.74 -0.49 -0.72 0.4 - 0.37 - 0.38 -0.97 3.45 -1.41
AMTR_s00031p00054860 (evm_27.TU.AmTr_v1.0_scaffold00031.19)
- - - - -0.01 - - - -4.32 -5.72 0.55 2.62 -1.75 -4.28 -0.53 -1.4 1.68 - 0.9 0.28 2.4 -1.53
- - - -5.21 -1.85 - -6.68 - -3.35 -4.65 1.62 0.33 0.07 -1.52 -1.95 -0.5 1.9 0.55 0.4 0.01 2.79 -1.34
AMTR_s00034p00231020 (evm_27.TU.AmTr_v1.0_scaffold00034.109)
-1.18 - - - 0.16 - -4.55 - -2.37 -3.57 -0.47 - -0.41 -3.06 -2.85 -0.23 2.43 - - -0.34 3.45 -1.3
AMTR_s00035p00223940 (evm_27.TU.AmTr_v1.0_scaffold00035.50)
-3.71 - - -1.46 -3.52 - -7.06 - -5.16 -4.91 1.43 -1.1 -0.04 1.15 -0.28 -0.25 1.8 -1.29 -1.1 0.3 2.77 -0.02
AMTR_s00039p00205290 (evm_27.TU.AmTr_v1.0_scaffold00039.171)
-1.65 - - -1.95 -0.63 - -5.31 - -2.8 -5.27 1.75 0.64 -0.84 -0.27 -1.22 -1.34 0.52 1.97 0.51 0.76 2.1 -0.57
AMTR_s00040p00232750 (evm_27.TU.AmTr_v1.0_scaffold00040.287)
- - - - -0.96 - -2.21 - -2.4 -2.29 -0.12 0.64 0.15 -0.44 -1.54 - 1.4 2.03 - -1.21 3.1 -1.0
AMTR_s00040p00233450 (evm_27.TU.AmTr_v1.0_scaffold00040.293)
- - - - -0.99 - -3.6 - -1.86 -1.36 1.4 0.56 -0.65 -0.44 -0.86 -0.0 1.68 1.59 -0.2 -0.47 2.33 -0.17
- - - - - - - - -2.78 -0.73 1.3 - -0.2 0.6 0.11 - 1.15 - - 0.4 3.37 0.55
AMTR_s00051p00111380 (evm_27.TU.AmTr_v1.0_scaffold00051.43)
- - - - 1.63 - -3.93 - -1.3 -2.54 -1.13 - -0.97 1.63 -1.4 - 1.18 0.46 -0.7 -0.72 3.11 -1.68
AMTR_s00061p00088840 (evm_27.TU.AmTr_v1.0_scaffold00061.65)
- - - - -0.88 - -4.04 - -1.75 -2.83 0.37 1.85 0.28 -0.34 0.44 - 1.38 -0.34 -0.11 -0.31 2.82 -0.96
AMTR_s00062p00156060 (evm_27.TU.AmTr_v1.0_scaffold00062.143)
- - - - -1.5 - -2.93 - -1.61 -1.35 -0.27 0.6 -0.09 -0.47 -0.12 - 1.56 - -0.57 -0.36 3.42 -0.43
AMTR_s00068p00126380 (evm_27.TU.AmTr_v1.0_scaffold00068.84)
- - - - -0.39 - -1.97 - -0.21 -0.72 1.62 -0.11 0.62 -0.33 -0.74 - 1.82 -0.31 -0.76 0.27 2.54 -0.67
AMTR_s00068p00126550 (evm_27.TU.AmTr_v1.0_scaffold00068.85)
- - - - 0.24 - -2.97 - -0.21 -0.22 0.39 1.73 -0.15 0.01 -0.95 - 1.15 0.22 -1.76 0.02 2.52 0.55
AMTR_s00069p00045060 (evm_27.TU.AmTr_v1.0_scaffold00069.27)
- - - - -0.79 - -1.46 - 0.08 -0.31 1.19 -0.29 -0.0 -0.01 -0.27 -0.85 -1.43 1.1 0.5 0.11 2.82 -0.63
AMTR_s00069p00093200 (evm_27.TU.AmTr_v1.0_scaffold00069.58)
- - - -1.36 -2.19 - - - -2.55 -1.05 - - -2.67 -1.21 0.57 - - - 1.1 1.45 3.69 -0.2
AMTR_s00075p00162500 (evm_27.TU.AmTr_v1.0_scaffold00075.50)
- - - 0.59 -1.28 - -4.93 - -3.3 -3.39 2.04 0.72 -1.22 -4.45 -1.8 - -1.41 0.53 - -0.3 3.38 -1.64
AMTR_s00080p00146850 (evm_27.TU.AmTr_v1.0_scaffold00080.64)
- - - - 0.7 - - - -4.2 -3.45 0.12 1.88 -0.54 -1.04 0.57 - 1.1 0.69 -0.29 -2.06 2.86 -0.5
AMTR_s00090p00121280 (evm_27.TU.AmTr_v1.0_scaffold00090.59)
- - - - -1.33 - -6.46 - -4.26 -3.49 1.72 0.56 0.67 -0.67 -0.61 -0.74 2.03 0.37 -0.68 0.44 2.35 -0.45
- - - - -0.14 - -2.35 - -1.26 -1.19 1.93 0.52 0.89 0.57 -0.76 - -0.53 - - 1.13 2.91 -1.15
AMTR_s00107p00151740 (evm_27.TU.AmTr_v1.0_scaffold00107.46)
- - - - - - - - - - 1.72 - 0.42 - - - 1.56 - - -1.14 3.66 0.42
AMTR_s00112p00020820 (evm_27.TU.AmTr_v1.0_scaffold00112.5)
- - - - - - - - -4.52 -3.78 1.85 0.26 -1.18 -0.19 -1.25 - -0.73 0.06 - 1.21 3.49 -2.77
AMTR_s00117p00015450 (evm_27.TU.AmTr_v1.0_scaffold00117.2)
- - - - - - - - - - 0.88 - -0.95 -2.94 -2.09 - 1.62 - - -2.16 4.0 -
AMTR_s00129p00094430 (evm_27.TU.AmTr_v1.0_scaffold00129.67)
- - - - 1.2 - - - - -2.39 0.34 - -0.46 -0.95 0.55 - 1.23 2.02 - 0.28 2.86 -0.66
AMTR_s00136p00097000 (evm_27.TU.AmTr_v1.0_scaffold00136.51)
- - - - -1.38 - -2.45 - -0.45 -0.41 0.6 1.39 -1.21 0.15 -1.82 - 0.33 1.19 1.43 0.22 2.62 -1.25
AMTR_s00137p00063560 (evm_27.TU.AmTr_v1.0_scaffold00137.24)
- - - - -1.41 - - - -3.83 - 1.3 - -1.4 -1.24 -2.08 - 2.32 - -0.52 -0.42 3.48 -1.12
AMTR_s00137p00101910 (evm_27.TU.AmTr_v1.0_scaffold00137.50)
- - - - - - - - - - 2.61 - -2.01 - - - 1.47 - - - 3.69 -
AMTR_s00177p00030580 (evm_27.TU.AmTr_v1.0_scaffold00177.9)
- - - - -0.55 - - - -3.09 -5.84 1.55 1.37 -1.07 -2.48 -1.55 0.48 0.4 0.44 0.56 -0.45 2.95 -0.53
AMTR_s00183p00030310 (evm_27.TU.AmTr_v1.0_scaffold00183.8)
- - - - -2.06 - -3.55 - -1.96 -2.1 -0.62 1.12 1.11 -0.82 -0.73 - 0.67 1.93 - 0.84 2.77 0.02
AMTR_s00184p00031620 (evm_27.TU.AmTr_v1.0_scaffold00184.13)
0.89 - -29.88 - 0.44 - - - -2.87 -3.01 1.33 0.18 -0.79 -1.54 -0.96 - 1.05 -1.44 0.32 -1.18 3.15 -1.22
AMTR_s00185p00043310 (evm_27.TU.AmTr_v1.0_scaffold00185.16)
- - - - -2.07 - -1.93 - -1.44 -2.25 0.49 1.68 0.03 -0.44 0.56 -0.88 1.49 1.07 -1.67 -2.21 2.5 0.52
AMTR_s00193p00026850 (evm_27.TU.AmTr_v1.0_scaffold00193.6)
- - - - 0.16 - -1.94 - -1.34 -1.42 0.79 - -0.06 0.19 -0.86 - 2.86 - - -0.61 2.88 -2.06
AMTR_s00296p00020250 (evm_27.TU.AmTr_v1.0_scaffold00296.1)
- - - -0.36 0.3 - -6.57 -5.45 -3.61 -4.5 0.67 -0.0 1.11 -1.2 -1.32 -0.32 1.87 -0.47 -2.19 0.54 2.73 -0.43
- - - -5.63 -0.77 - -4.64 - -2.9 -3.67 1.09 0.39 1.34 -0.69 -1.05 -0.52 1.41 -0.18 0.05 0.78 2.58 0.13
AMTR_s03100p00001960 (evm_27.TU.AmTr_v1.0_scaffold03100.1)
- - - -2.28 -1.12 - - - -3.51 -1.96 1.64 - -1.85 -3.11 -3.22 - 2.38 - - -23.4 3.4 0.72
AMTR_s03357p00002730 (evm_27.TU.AmTr_v1.0_scaffold03357.1)
-2.77 - -0.54 -0.07 0.64 - -1.44 - -1.33 -1.9 0.51 -0.77 -0.28 -1.94 0.3 0.11 1.6 0.19 -1.59 0.01 2.7 -2.51

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.