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  5. AMTR_s00006p00254090

AMTR_s00006p00254090 (BPC3, ATBPC3,...)


Aliases : BPC3, ATBPC3, evm_27.TU.AmTr_v1.0_scaffold00006.175

Description : RNA biosynthesis.transcriptional activation.BBR/BPC transcription factor


Gene families : OG0000626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00254090

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene16415.t1 BPC3, ATBPC3,... BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19292.t1 BPC3, ATBPC3,... BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0487.g073459 BPC3, ATBPC3 BBR/BPC-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g03708 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03804 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22565 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011589001 ATBPC1, BPC1, BBR RNA biosynthesis.transcriptional activation.BBR/BPC... 0.04 OrthoFinder output from all 47 species
MpVg00350.1 BPC3, ATBPC3 No annotation 0.05 OrthoFinder output from all 47 species
Ore_g05166 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01263 BBR/BPC5, BPC5, ATBPC5 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03032 BBR/BPC5, BPC5, ATBPC5 BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g081170.3.1 BPC6, BBR/BPC6,... transcription factor (BBR/BPC) 0.03 OrthoFinder output from all 47 species
Spa_g54835 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01680 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR010409 GAGA-bd_tscrpt_act 58 356
No external refs found!