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  5. AMTR_s00006p00249860

AMTR_s00006p00249860 (ERF1-3,...)


Aliases : ERF1-3, evm_27.TU.AmTr_v1.0_scaffold00006.145

Description : Protein biosynthesis.translation termination.eRF1 peptide release factor


Gene families : OG0002707 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002707_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00249860

Target Alias Description ECC score Gene Family Method Actions
Adi_g059888 ERF1-2 translation termination factor *(eRF1) & original... 0.05 OrthoFinder output from all 47 species
Adi_g111749 ERF1-3 translation termination factor *(eRF1) & original... 0.02 OrthoFinder output from all 47 species
Ala_g13978 ERF1-3 translation termination factor *(eRF1) & original... 0.03 OrthoFinder output from all 47 species
Als_g61509 ERF1-3 translation termination factor *(eRF1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene47325.t1 ERF1-3, Aspi01Gene47325 translation termination factor *(eRF1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g34371 ERF1-3 translation termination factor *(eRF1) & original... 0.05 OrthoFinder output from all 47 species
LOC_Os03g49580.1 ERF1-3, LOC_Os03g49580 eRF1 peptide release factor 0.03 OrthoFinder output from all 47 species
LOC_Os05g31020.1 ERF1-2, LOC_Os05g31020 eRF1 peptide release factor 0.05 OrthoFinder output from all 47 species
Spa_g06518 ERF1-2 translation termination factor *(eRF1) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005141 eRF1_2 144 278
IPR005140 eRF1_1_Pelota 7 139
IPR005142 eRF1_3 281 418
No external refs found!