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  5. AMTR_s00005p00210680

AMTR_s00005p00210680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.88

Description : Ripening-related protein grip22 OS=Vitis vinifera


Gene families : OG0001679 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001679_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00210680
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00196350 evm_27.TU.AmTr_v1... Putative ripening-related protein 2 OS=Oryza sativa... 0.11 OrthoFinder output from all 47 species
AMTR_s00002p00197000 evm_27.TU.AmTr_v1... Putative ripening-related protein 1 OS=Oryza sativa... 0.08 OrthoFinder output from all 47 species
AMTR_s00005p00207640 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
AMTR_s00005p00208720 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.12 OrthoFinder output from all 47 species
AMTR_s00011p00263200 evm_27.TU.AmTr_v1... Putative ripening-related protein 5 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Aspi01Gene50260.t1 Aspi01Gene50260 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.32G075600.1 Ceric.32G075600 not classified & original description: pacid=50597647... 0.03 OrthoFinder output from all 47 species
Ceric.32G075700.1 Ceric.32G075700 not classified & original description: pacid=50597552... 0.03 OrthoFinder output from all 47 species
Dcu_g14173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026884001 No alias Putative ripening-related protein 5 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
GSVIVT01026885001 No alias Putative ripening-related protein 5 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Gb_09976 No alias Ripening-related protein grip22 OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
LOC_Os04g29550.1 LOC_Os04g29550 Putative ripening-related protein 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os10g34760.1 LOC_Os10g34760 Putative ripening-related protein 6 OS=Oryza sativa... 0.08 OrthoFinder output from all 47 species
LOC_Os10g34770.1 LOC_Os10g34770 Putative ripening-related protein 7 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
LOC_Os10g34840.1 LOC_Os10g34840 Ripening-related protein 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Len_g44254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g49301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29187 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36438 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g33994 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g34399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo430105 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g32195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!