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  5. AMTR_s00005p00176760

AMTR_s00005p00176760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.58

No description available


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00176760
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT1G29520 No alias AWPM-19-like family protein 0.13 OrthoFinder output from all 47 species
AT5G18970 No alias AWPM-19-like family protein 0.13 OrthoFinder output from all 47 species
AT5G46530 No alias AWPM-19-like family protein 0.14 OrthoFinder output from all 47 species
Adi_g011454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34673.t1 Aspi01Gene34673 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44336.t1 Aspi01Gene44336 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007412 No alias not classified & original description: CDS=218-754 0.02 OrthoFinder output from all 47 species
Ceric.19G032900.1 Ceric.19G032900 not classified & original description: pacid=50575324... 0.02 OrthoFinder output from all 47 species
Ceric.37G004800.1 Ceric.37G004800 not classified & original description: pacid=50615541... 0.04 OrthoFinder output from all 47 species
Ceric.37G005000.1 Ceric.37G005000 not classified & original description: pacid=50616787... 0.05 OrthoFinder output from all 47 species
Ceric.37G005100.1 Ceric.37G005100 not classified & original description: pacid=50616791... 0.06 OrthoFinder output from all 47 species
Ceric.37G005200.1 Ceric.37G005200 not classified & original description: pacid=50615572... 0.07 OrthoFinder output from all 47 species
Dac_g01968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017867001 No alias No description available 0.1 OrthoFinder output from all 47 species
GSVIVT01031072001 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
LOC_Os01g14530.1 LOC_Os01g14530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g50440.1 LOC_Os01g50440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g03103 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g14386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23675 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g37428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_101266g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10428014g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_105516g0020 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_482741g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_8902028g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp6g01060.1 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Msp_g11224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019776 No alias not classified & original description: CDS=123-641 0.04 OrthoFinder output from all 47 species
Sam_g00344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo437726 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Solyc01g080290.3.1 Solyc01g080290 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc02g071310.3.1 Solyc02g071310 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.11 OrthoFinder output from all 47 species
Spa_g02439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39083 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g12556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016338_P001 Zm00001e016338 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e020052_P001 Zm00001e020052 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e026824_P001 Zm00001e026824 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e028127_P001 Zm00001e028127 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e033373_P001 Zm00001e033373 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 11 130
No external refs found!