AMTR_s00004p00263150 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.263

Description : Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana

Gene families : OG0000079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00004p00263150

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00026p00213790	XTH6,...	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	OrthoFinder output from all 47 species
AMTR_s00065p00199650	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
Gb_22329	XTH9	Xyloglucan endotransglucosylase/hydrolase protein 9...	0.02	OrthoFinder output from all 47 species
Mp2g21520.1	XTH5, EXGT-A4	Enzyme classification.EC_2 transferases.EC_2.4...	0.01	OrthoFinder output from all 47 species
Pnu_g33263	XTR6, XTH23	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g05181	No alias	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc07g006850.3.1	XTR3, XTH25,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
Solyc07g055990.3.1	XTH16, Solyc07g055990	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
Solyc10g005350.3.1	XTH8, Solyc10g005350	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000757	GH16	16	72

External Links

No external refs found!