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  5. AMTR_s00003p00271650

AMTR_s00003p00271650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.464

Description : Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana


Gene families : OG0005755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00271650

Target Alias Description ECC score Gene Family Method Actions
Adi_g010689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21301 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34090.t1 Aspi01Gene34090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008383 No alias not classified & original description: CDS=1-1593 0.02 OrthoFinder output from all 47 species
Cba_g03773 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.17G018600.1 Ceric.17G018600 not classified & original description: pacid=50617526... 0.07 OrthoFinder output from all 47 species
Ehy_g07655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000458001 No alias Uncharacterized GPI-anchored protein At4g28100... 0.06 OrthoFinder output from all 47 species
GSVIVT01008405001 No alias Uncharacterized GPI-anchored protein At4g28100... 0.04 OrthoFinder output from all 47 species
LOC_Os07g37156.1 LOC_Os07g37156 Uncharacterized GPI-anchored protein At4g28100... 0.05 OrthoFinder output from all 47 species
Len_g48783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_12527g0010 No alias Uncharacterized GPI-anchored protein At4g28100... 0.03 OrthoFinder output from all 47 species
MA_33094g0010 No alias Uncharacterized GPI-anchored protein At4g28100... 0.02 OrthoFinder output from all 47 species
Mp2g08190.1 No alias Uncharacterized GPI-anchored protein At4g28100... 0.03 OrthoFinder output from all 47 species
Msp_g08016 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g12597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014369 No alias not classified & original description: CDS=1-1302 0.03 OrthoFinder output from all 47 species
Solyc07g054850.3.1 Solyc07g054850 Uncharacterized GPI-anchored protein At4g28100... 0.03 OrthoFinder output from all 47 species
Zm00001e010543_P002 Zm00001e010543 Uncharacterized GPI-anchored protein At4g28100... 0.03 OrthoFinder output from all 47 species
Zm00001e035229_P001 Zm00001e035229 Uncharacterized GPI-anchored protein At4g28100... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
MF GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016433 rRNA (adenine) methyltransferase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!