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  5. AMTR_s00003p00269610

AMTR_s00003p00269610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.411

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL23 component


Gene families : OG0006048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006048_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00003p00269610
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Ceric.03G042300.1 Ceric.03G042300 component *(uL23m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Mp1g23410.1 No alias component mtRPL23 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0032934 sterol binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR013025 Ribosomal_L25/23 33 91
No external refs found!