Heatmap: Cluster_88 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00230390 (evm_27.TU.AmTr_v1.0_scaffold00001.243)
-0.25 - 3.43 - 2.32 - - - - -3.38 - - -3.67 -2.74 2.04 - - - - -1.03 - -1.15
AMTR_s00001p00245250 (evm_27.TU.AmTr_v1.0_scaffold00001.291)
1.25 2.13 3.05 - 1.75 - - - - - - - -3.19 - -1.58 - - - - - 1.36 -0.72
AMTR_s00003p00269610 (evm_27.TU.AmTr_v1.0_scaffold00003.411)
0.65 -0.62 1.44 -4.38 1.75 -0.79 -0.03 -1.09 -0.72 -0.59 0.16 0.34 -0.21 -0.34 -0.19 -0.0 0.18 -0.48 -0.21 -0.39 -1.65 -0.66
AMTR_s00006p00178670 (evm_27.TU.AmTr_v1.0_scaffold00006.69)
- - 4.17 -1.39 1.57 - - - - - - - -5.66 -4.0 -4.87 - -3.23 - - - -1.6 -5.07
AMTR_s00009p00175930 (evm_27.TU.AmTr_v1.0_scaffold00009.106)
- - 2.02 -0.02 0.24 -5.13 -0.09 - -0.18 -0.38 0.68 0.94 0.16 -0.45 -0.29 0.21 0.45 0.5 -0.0 -1.84 -0.21 -0.2
AMTR_s00009p00256480 (evm_27.TU.AmTr_v1.0_scaffold00009.286)
-0.85 0.28 2.32 -5.76 2.19 -3.08 -3.03 - -3.33 -2.86 -0.09 -0.25 0.61 -0.57 0.73 -0.55 -0.02 -1.65 -0.77 -0.58 -0.98 -0.36
AMTR_s00010p00101850 (evm_27.TU.AmTr_v1.0_scaffold00010.56)
- - 3.29 - -1.65 - - - - - 0.21 -0.39 -1.68 -1.75 -2.14 0.27 1.75 -0.16 0.13 -0.48 0.56 -1.5
AMTR_s00014p00090010 (evm_27.TU.AmTr_v1.0_scaffold00014.28)
- -5.66 2.87 -3.28 0.06 -1.66 -8.22 - -7.48 - 0.86 0.31 -1.49 -3.25 -1.01 0.41 1.36 0.42 0.25 -0.52 0.73 -1.22
AMTR_s00016p00157750 (evm_27.TU.AmTr_v1.0_scaffold00016.113)
- - 3.56 -4.75 1.82 -3.22 -5.83 -5.01 -5.97 -5.79 -2.4 0.71 -2.39 -4.36 1.6 -3.95 -2.44 -2.57 -3.09 -2.57 -1.41 -1.99
AMTR_s00022p00232590 (evm_27.TU.AmTr_v1.0_scaffold00022.316)
- -1.06 3.1 - -1.54 - -5.96 - -3.88 -5.27 -0.39 0.23 -0.68 -2.15 -0.96 0.87 1.02 0.97 -0.87 -0.09 0.26 -0.56
- - 3.59 - 2.89 -1.27 -4.65 - - -3.66 - - -2.03 -3.38 -3.35 - - - - - 0.58 -3.74
AMTR_s00025p00221220 (evm_27.TU.AmTr_v1.0_scaffold00025.309)
-4.77 - 2.63 -0.57 1.08 -3.09 -4.89 - -5.12 -5.48 0.62 0.94 -0.4 -2.25 0.08 -0.0 0.51 0.09 0.7 -0.24 -0.2 -1.06
AMTR_s00032p00131530 (evm_27.TU.AmTr_v1.0_scaffold00032.90)
- - 2.97 -5.88 0.78 - -1.77 - 0.77 0.07 0.26 0.4 -0.25 -2.4 -1.93 -1.49 1.37 -0.11 -0.63 -1.86 -2.27 -0.76
AMTR_s00033p00201170 (evm_27.TU.AmTr_v1.0_scaffold00033.169)
- - 2.66 - -0.18 - -4.01 - -4.65 -4.91 -0.51 0.67 -0.22 -0.94 -0.6 -0.31 0.74 0.8 1.2 -0.13 0.64 0.41
AMTR_s00036p00218590 (evm_27.TU.AmTr_v1.0_scaffold00036.151)
- - 3.83 - 1.84 - - - - - - - - - 2.07 - - - - - - -
AMTR_s00038p00185310 (evm_27.TU.AmTr_v1.0_scaffold00038.127)
- - 2.84 - 2.29 - -1.66 - -1.18 -0.9 - - -1.51 -2.63 -0.34 1.27 0.85 1.64 - - - -
AMTR_s00041p00233780 (evm_27.TU.AmTr_v1.0_scaffold00041.283)
- 1.14 3.82 - 2.5 - - - - - - - - - - - - - - - - -
AMTR_s00044p00038930 (evm_27.TU.AmTr_v1.0_scaffold00044.13)
- - 2.43 -2.43 0.09 -4.29 0.47 - 0.02 -0.22 1.29 1.03 -0.41 -0.82 -0.33 -0.48 0.74 -0.59 0.2 -2.74 -0.34 -1.69
-4.91 - 2.69 -3.52 -0.97 - -7.42 - -4.25 -5.85 0.13 0.37 -0.45 -2.05 -0.09 0.55 1.27 0.45 0.3 0.56 1.06 -1.02
AMTR_s00045p00201530 (evm_27.TU.AmTr_v1.0_scaffold00045.261)
-0.32 -0.17 1.75 -4.93 2.03 -0.72 -1.73 -0.28 -1.44 -1.34 -0.02 0.45 0.4 -0.31 0.16 -0.89 -0.37 -0.44 -0.26 -0.94 -1.62 0.02
AMTR_s00046p00202770 (evm_27.TU.AmTr_v1.0_scaffold00046.128)
-2.67 0.86 2.26 -2.6 -1.84 -3.92 -4.1 -0.06 -4.12 -3.6 -0.35 -0.54 -0.68 -1.35 -1.34 0.8 1.16 0.42 0.49 0.69 0.92 -1.12
0.22 - 1.76 -0.39 2.6 - -0.67 - 0.87 -0.3 -3.04 1.06 0.14 0.32 0.48 -1.82 -2.4 - -1.52 -5.59 - -0.85
AMTR_s00061p00192880 (evm_27.TU.AmTr_v1.0_scaffold00061.222)
- - 3.4 - 2.11 - - - - - - - -3.32 -1.73 - - - - - - 2.75 -
AMTR_s00066p00090800 (evm_27.TU.AmTr_v1.0_scaffold00066.71)
-4.95 - 2.8 - -0.36 -3.86 -1.27 -6.94 -1.3 -1.56 0.21 0.15 -0.72 -1.9 -0.72 0.08 1.03 0.68 -0.18 -0.14 0.92 -0.18
AMTR_s00068p00032680 (evm_27.TU.AmTr_v1.0_scaffold00068.9)
1.94 -0.49 2.73 -5.58 2.57 -4.49 -3.72 -2.42 -3.25 -3.71 -1.51 -1.77 -7.04 -0.46 1.06 - -3.39 - -3.57 -0.8 - -2.67
1.79 - 2.57 -8.95 2.56 -3.92 0.22 -0.59 0.46 0.46 -5.28 -1.62 -5.53 -2.42 0.56 - - - -6.43 - - -5.8
AMTR_s00070p00200710 (evm_27.TU.AmTr_v1.0_scaffold00070.136)
- - 3.98 - 2.57 - - - - - - - - - -1.97 - - - - - - -
AMTR_s00071p00122330 (evm_27.TU.AmTr_v1.0_scaffold00071.98)
- - 2.74 - 0.25 - 0.2 - 0.93 0.31 0.67 0.71 1.17 -1.08 -1.33 - 1.33 - -2.78 -4.52 - -0.37
AMTR_s00075p00087750 (evm_27.TU.AmTr_v1.0_scaffold00075.26)
- - 2.79 - 2.97 -0.01 - - -0.33 -1.15 0.0 - - -0.5 1.34 - -0.35 - - - - -
AMTR_s00077p00104530 (evm_27.TU.AmTr_v1.0_scaffold00077.89)
- - 3.66 - -1.79 - -5.98 - -4.23 -5.65 -1.93 0.41 -2.18 -0.39 -0.52 -1.73 -3.31 - -0.76 0.66 1.29 -0.49
AMTR_s00077p00162540 (evm_27.TU.AmTr_v1.0_scaffold00077.169)
- - 3.64 - 2.27 0.24 -1.46 - -1.85 -0.93 - - -1.19 -1.92 -0.36 - - - -0.48 - - -2.45
-3.51 - 3.06 - -0.34 - - - -6.13 -7.4 1.77 0.9 0.68 -3.27 0.31 -2.67 0.33 0.29 -0.99 -4.34 - 0.43
- - 3.92 - 1.68 - -3.03 - - - -0.09 - -0.15 - - - - - 0.3 - - -1.05
AMTR_s00099p00094660 (evm_27.TU.AmTr_v1.0_scaffold00099.72)
-1.72 0.32 2.41 -1.23 2.28 - - -1.91 -1.68 -1.49 - - 0.72 -2.92 -1.79 - - - -0.31 -3.39 2.51 -2.05
- - 2.63 - 1.23 - -0.69 - 0.49 -0.66 0.33 1.64 -0.52 -0.85 -0.98 -1.93 1.37 -1.55 -2.72 -1.22 -1.71 -0.7
AMTR_s00101p00133070 (evm_27.TU.AmTr_v1.0_scaffold00101.108)
- - 2.23 - 1.91 - 0.47 - -0.36 -0.21 -1.8 - -1.13 -2.01 0.1 - -2.2 - -1.23 -0.23 2.75 -2.19
1.09 - 2.74 - 3.04 - -5.86 0.52 -3.77 -0.28 -1.75 -0.01 - -4.81 -2.16 -0.99 - -2.2 -3.18 -4.6 -2.36 -
AMTR_s00113p00023020 (evm_27.TU.AmTr_v1.0_scaffold00113.5)
0.85 - 1.9 - 2.88 - - -4.54 -3.14 0.13 -0.28 2.04 - -3.99 -1.25 -1.1 - 0.85 - -3.73 - -4.14
- - 2.63 - 1.35 - -2.36 - -0.2 -0.76 0.37 0.29 -0.77 -0.83 -0.97 -2.15 0.78 0.96 0.07 -2.01 0.57 -0.41
AMTR_s00134p00024660 (evm_27.TU.AmTr_v1.0_scaffold00134.3)
- - 3.84 - 2.13 - -3.23 - -0.41 -0.91 - - -2.97 -2.16 -0.64 - - - - - -0.09 -
AMTR_s00146p00060910 (evm_27.TU.AmTr_v1.0_scaffold00146.36)
- - 3.12 - 3.05 - - - - - - - -0.91 -2.19 -0.04 0.11 -0.31 - -0.68 -0.74 - -2.32
AMTR_s00149p00016960 (evm_27.TU.AmTr_v1.0_scaffold00149.2)
- - 1.92 -0.6 2.42 - -3.48 - -3.98 -4.69 -1.95 0.79 -2.06 -3.08 -3.28 -0.77 - 1.41 -0.06 -2.52 2.35 -3.46
AMTR_s00174p00039060 (evm_27.TU.AmTr_v1.0_scaffold00174.15)
-2.75 - 3.36 - 1.2 - -0.66 - -1.4 -1.26 -0.52 -0.76 -0.4 -2.64 -1.76 0.26 1.35 -0.96 -0.12 -3.07 - -4.54
AMTR_s00194p00025300 (evm_27.TU.AmTr_v1.0_scaffold00194.10)
- - 3.85 - 2.93 - - - - - - - - - - - - - - - - -
AMTR_s01536p00009150 (evm_27.TU.AmTr_v1.0_scaffold01536.1)
- - 3.8 - 3.01 - - - - - - - - - - - - - - - - -
AMTR_s02817p00007570 (evm_27.TU.AmTr_v1.0_scaffold02817.1)
- - 3.31 - 2.65 - - - - - - - 2.5 - -2.56 - - - - - - -
AMTR_s03350p00006190 (evm_27.TU.AmTr_v1.0_scaffold03350.1)
- - 4.01 - 2.33 - -2.89 - -1.65 -2.27 - - - - -2.16 - - - - - - -
AMTR_s04541p00004770 (evm_27.TU.AmTr_v1.0_scaffold04541.1)
- - 3.27 - 3.63 - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.