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  5. AMTR_s00003p00268960

AMTR_s00003p00268960 (LGT4, GAUT10,...)


Aliases : LGT4, GAUT10, evm_27.TU.AmTr_v1.0_scaffold00003.402

Description : Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana


Gene families : OG0000136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00268960

Target Alias Description ECC score Gene Family Method Actions
AT3G02350 GAUT9 galacturonosyltransferase 9 0.02 OrthoFinder output from all 47 species
AT3G61130 LGT1, GAUT1 galacturonosyltransferase 1 0.04 OrthoFinder output from all 47 species
Aev_g18081 GAUT13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02222 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Ala_g09639 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Ala_g19230 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.04 OrthoFinder output from all 47 species
Als_g18250 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.04 OrthoFinder output from all 47 species
Aop_g03521 GAUT11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03527 GAUT13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12570 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aop_g14468 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aop_g62565 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Aspi01Gene56904.t1 LGT1, GAUT1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58221.t1 GAUT13, Aspi01Gene58221 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0034.g025186 GAUT9 not classified & original description: CDS=156-1763 0.02 OrthoFinder output from all 47 species
Azfi_s0071.g036798 GAUT13 not classified & original description: CDS=217-1806 0.02 OrthoFinder output from all 47 species
Azfi_s2631.g112462 GAUT13 not classified & original description: CDS=217-1806 0.02 OrthoFinder output from all 47 species
Cba_g13854 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Cba_g37053 GAUT8, QUA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G000900.1 LGT1, GAUT1,... component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Ceric.26G045000.1 LGT4, GAUT10,... not classified & original description: pacid=50599708... 0.03 OrthoFinder output from all 47 species
Ceric.31G059300.1 GAUT8, QUA1,... glycosyltransferase (QUA1) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Ceric.39G020500.1 GAUT9, Ceric.39G020500 not classified & original description: pacid=50583275... 0.03 OrthoFinder output from all 47 species
Dcu_g34317 GAUT13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21991 GAUT9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011500001 GAUT14 Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01027574001 LGT1, GAUT1 Cell wall.pectin.homogalacturonan.synthesis.GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
GSVIVT01036507001 GAUT9 Probable galacturonosyltransferase 9 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os05g40720.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
Lfl_g04783 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
MA_10399g0020 GAUT13 Probable galacturonosyltransferase 14 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_131632g0010 LGT1, GAUT1 Polygalacturonate 4-alpha-galacturonosyltransferase... 0.03 OrthoFinder output from all 47 species
Mp1g29030.1 LGT1, GAUT1 Polygalacturonate 4-alpha-galacturonosyltransferase... 0.03 OrthoFinder output from all 47 species
Nbi_g02277 GAUT8, QUA1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02991 LGT4, GAUT10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c11_17370V3.1 Pp3c11_17370 galacturonosyltransferase 1 0.03 OrthoFinder output from all 47 species
Ppi_g03136 GAUT14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo146475 LGT1, GAUT1 Polygalacturonate 4-alpha-galacturonosyltransferase... 0.03 OrthoFinder output from all 47 species
Solyc01g093970.4.1 LGT1, GAUT1,... component GAUT1 of GAUT1:GAUT7 galacturonosyltransferase complex 0.06 OrthoFinder output from all 47 species
Solyc01g112210.3.1 GAUT3, Solyc01g112210 Probable galacturonosyltransferase 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc03g013630.4.1 GAUT13, Solyc03g013630 Probable galacturonosyltransferase 14 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g015270.3.1 GAUT4, Solyc04g015270 Probable galacturonosyltransferase 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g064490.3.1 LGT4, GAUT10,... Probable galacturonosyltransferase 10 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc07g005360.3.1 GAUT6, Solyc07g005360 Probable galacturonosyltransferase 6 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Spa_g04446 GAUT9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13122 GAUT8, QUA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010031_P002 GAUT4, Zm00001e010031 Probable galacturonosyltransferase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e018135_P001 GAUT14, Zm00001e018135 Probable galacturonosyltransferase 14 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e038738_P001 GAUT14, Zm00001e038738 Probable galacturonosyltransferase 14 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0018298 obsolete protein-chromophore linkage IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 208 478
No external refs found!