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  5. AMTR_s00003p00268300

AMTR_s00003p00268300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.397

Description : GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0005393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00268300

Target Alias Description ECC score Gene Family Method Actions
Adi_g045219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g045220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022080.6 ATNOA1, ATNOS1,... NO-associated protein 1, chloroplastic/mitochondrial... 0.01 OrthoFinder output from all 47 species
Dcu_g19887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033559001 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.09 OrthoFinder output from all 47 species
LOC_Os06g30380.1 LOC_Os06g30380 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.07 OrthoFinder output from all 47 species
Len_g19651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp7g03470.1 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.05 OrthoFinder output from all 47 species
Nbi_g19658 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g16309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024384 No alias not classified & original description: CDS=72-1961 0.03 OrthoFinder output from all 47 species
Solyc01g006180.4.1 Solyc01g006180 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.02 OrthoFinder output from all 47 species
Solyc04g009300.4.1 Solyc04g009300 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.04 OrthoFinder output from all 47 species
Spa_g00420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024057_P001 Zm00001e024057 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 392 454
No external refs found!