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Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.347
Description : Pentatricopeptide repeat-containing protein At1g73710 OS=Arabidopsis thaliana
Gene families : OG0006545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006545_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G73710 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G23020 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g014933 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06354 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15281 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.27G000500.1 | Ceric.27G000500 | not classified & original description: pacid=50606226... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g09918 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Gb_11434 | No alias | Pentatricopeptide repeat-containing protein At1g73710... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g06710.1 | LOC_Os03g06710 | Pentatricopeptide repeat-containing protein At3g23020... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g28900.1 | LOC_Os07g28900 | Pentatricopeptide repeat-containing protein At1g73710... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004055 | No alias | not classified & original description: CDS=1-1875 | 0.05 | OrthoFinder output from all 47 species | |
| Smo77736 | No alias | Pentatricopeptide repeat-containing protein At3g23020... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc07g054480.3.1 | Solyc07g054480 | Pentatricopeptide repeat-containing protein At1g73710... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 474 | 496 |
| IPR002885 | Pentatricopeptide_repeat | 507 | 554 |
| IPR002885 | Pentatricopeptide_repeat | 611 | 660 |
| IPR002885 | Pentatricopeptide_repeat | 330 | 375 |
| IPR002885 | Pentatricopeptide_repeat | 857 | 885 |
| IPR002885 | Pentatricopeptide_repeat | 687 | 713 |
| IPR002885 | Pentatricopeptide_repeat | 579 | 609 |
| IPR002885 | Pentatricopeptide_repeat | 754 | 781 |
| IPR002885 | Pentatricopeptide_repeat | 298 | 328 |
| IPR002885 | Pentatricopeptide_repeat | 720 | 748 |
| IPR002885 | Pentatricopeptide_repeat | 891 | 919 |
| IPR002885 | Pentatricopeptide_repeat | 165 | 194 |
| IPR002885 | Pentatricopeptide_repeat | 403 | 433 |
| No external refs found! |