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  5. AMTR_s00003p00211130

AMTR_s00003p00211130 (GolS1, AtGolS1,...)


Aliases : GolS1, AtGolS1, evm_27.TU.AmTr_v1.0_scaffold00003.201

Description : Carbohydrate metabolism.raffinose family oligosaccharide biosynthesis.galactinol synthase


Gene families : OG0002465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00211130

Target Alias Description ECC score Gene Family Method Actions
AT1G09350 AtGolS3, GolS3 galactinol synthase 3 0.03 OrthoFinder output from all 47 species
AT1G56600 AtGolS2, GolS2 galactinol synthase 2 0.03 OrthoFinder output from all 47 species
AT1G60470 AtGolS4, GolS4 galactinol synthase 4 0.05 OrthoFinder output from all 47 species
AT2G47180 GolS1, AtGolS1 galactinol synthase 1 0.02 OrthoFinder output from all 47 species
Ceric.01G033600.1 AtGolS4, GolS4,... galactinol synthase & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01031278001 AtGolS2, GolS2 Carbohydrate metabolism.raffinose family oligosaccharide... 0.03 OrthoFinder output from all 47 species
Gb_29309 AtGolS4, GolS4 galactinol synthase 0.03 OrthoFinder output from all 47 species
Smo83323 AtGolS3, GolS3 Carbohydrate metabolism.raffinose family oligosaccharide... 0.03 OrthoFinder output from all 47 species
Solyc01g100830.2.1 GolS1, AtGolS1,... galactinol synthase 0.03 OrthoFinder output from all 47 species
Solyc02g062590.3.1 AtGolS2, GolS2,... galactinol synthase 0.03 OrthoFinder output from all 47 species
Zm00001e001493_P002 GolS1, AtGolS1,... galactinol synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 20 263
No external refs found!