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Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.533
Description : Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00002p00268120 | |
| Cluster | HCCA: Cluster_78 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00268260 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00252350 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g22690... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00259690 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g46460,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00058p00187000 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33760... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00177p00030580 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G50270 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| AT2G44880 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G01580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G09040 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G39680 | EMB2744 | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g21644 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g46737 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16997 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g21668 | LPA66 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04930 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g26545 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g47255 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03193 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16535 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0002.g001614 | No alias | not classified & original description: CDS=1-2595 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19309 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19790 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g20250 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20751 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g33383 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33742 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34331 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67652 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g74667 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G059000.1 | Ceric.04G059000 | not classified & original description: pacid=50632212... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.20G048700.1 | CRR22, Ceric.20G048700 | not classified & original description: pacid=50567179... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.24G028500.1 | Ceric.24G028500 | not classified & original description: pacid=50629587... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.39G035400.1 | Ceric.39G035400 | not classified & original description: pacid=50583580... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g04265 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10590 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14062 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g30162 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08305 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g12101 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g28884 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g29466 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50097 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000072001 | No alias | Pentatricopeptide repeat-containing protein At3g05340... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01005577001 | EMB2261 | RNA processing.organelle machineries.RNA... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01012938001 | SLO1 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01016874001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01017075001 | OTP82 | Pentatricopeptide repeat-containing protein At3g12770... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01023860001 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01029885001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01033863001 | No alias | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04077 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_05554 | OTP84 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_08834 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_11545 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_11981 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_17077 | CRR22 | Pentatricopeptide repeat-containing protein At3g03580... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_21567 | CRR22 | RNA editing factor (MEF19) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23798 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_24126 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_26571 | OTP84 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_28037 | CRR22 | RNA editing factor (MEF19). RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_28390 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32099 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_33959 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_35108 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_36538 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38301 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_41325 | CRR22 | RNA editing factor (MEF19) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g41650.1 | LOC_Os01g41650 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g01610.1 | LOC_Os02g01610 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g09800.1 | OTP82, LOC_Os02g09800 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g08680.1 | LOC_Os03g08680 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g11700.1 | MEF19, LOC_Os03g11700 | Pentatricopeptide repeat-containing protein At4g21300... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g35610.1 | LOC_Os04g35610 | RNA editing factor (SLO2) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g57940.1 | CRR22, LOC_Os04g57940 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g20420.1 | LOC_Os07g20420 | Pentatricopeptide repeat-containing protein At3g26782,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g25280.1 | LOC_Os08g25280 | Pentatricopeptide repeat-containing protein At4g39530... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10428421g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10430171g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| MA_111990g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| MA_121102g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_122899g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_131437g0010 | No alias | RNA editing factor (MEF3) | 0.03 | OrthoFinder output from all 47 species | |
| MA_135424g0010 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
| MA_139163g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| MA_140208g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_210823g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At4g37170... | 0.03 | OrthoFinder output from all 47 species | |
| MA_25515g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_370961g0010 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_40997g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
| MA_41676g0020 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_733561g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| MA_7379g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| MA_73895g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.05 | OrthoFinder output from all 47 species | |
| MA_74986g0020 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_8210920g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| MA_87646g0010 | No alias | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
| MA_916566g0010 | OTP82 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03543 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g04385 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g14854 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g36747 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g41100 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g46049 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g24066 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g02088 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g40481 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15292 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05183 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05345 | EMB2261 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g08859 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g14586 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16324 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32640 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g41022 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53728 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g55132 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g081560.2.1 | Solyc01g081560 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g091610.1.1 | Solyc01g091610 | Pentatricopeptide repeat-containing protein At2g27610... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g070710.3.1 | Solyc02g070710 | Pentatricopeptide repeat-containing protein At3g20730... | 0.13 | OrthoFinder output from all 47 species | |
| Solyc03g093630.3.1 | CRR2, Solyc03g093630 | Pentatricopeptide repeat-containing protein At2g27610... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g097850.1.1 | Solyc03g097850 | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g063300.3.1 | Solyc04g063300 | Pentatricopeptide repeat-containing protein At3g26540... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g074160.3.1 | Solyc04g074160 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g046280.3.1 | Solyc05g046280 | RNA editing factor (MEF13) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g009500.1.1 | Solyc06g009500 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g082880.2.1 | Solyc06g082880 | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g042760.1.1 | Solyc07g042760 | Pentatricopeptide repeat-containing protein At4g31070,... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc07g053520.2.1 | SLO1, Solyc07g053520 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc08g023640.1.1 | Solyc08g023640 | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g008590.1.1 | Solyc10g008590 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc11g005970.1.1 | Solyc11g005970 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g008970.1.1 | Solyc11g008970 | Pentatricopeptide repeat-containing protein At4g39952,... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g067210.1.1 | Solyc11g067210 | Pentatricopeptide repeat-containing protein At2g27610... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g099620.1.1 | Solyc12g099620 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g099850.1.1 | Solyc12g099850 | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18079 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g30407 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g46234 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e001007_P001 | Zm00001e001007 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e001918_P001 | EMB2758, Zm00001e001918 | Pentatricopeptide repeat-containing protein At4g33990... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e007597_P001 | Zm00001e007597 | Pentatricopeptide repeat-containing protein At3g09040,... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e010182_P001 | Zm00001e010182 | Pentatricopeptide repeat-containing protein At2g36980,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012607_P002 | LOI1, MEF11,... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015358_P001 | Zm00001e015358 | Pentatricopeptide repeat-containing protein At5g39350... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018565_P001 | Zm00001e018565 | Pentatricopeptide repeat-containing protein At3g13880... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e019971_P001 | Zm00001e019971 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022858_P001 | Zm00001e022858 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023333_P001 | Zm00001e023333 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023504_P001 | CRR22, Zm00001e023504 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e030831_P001 | Zm00001e030831 | Pentatricopeptide repeat-containing protein At3g20730... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e033171_P001 | Zm00001e033171 | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e035654_P001 | EMB2758, Zm00001e035654 | Pentatricopeptide repeat-containing protein At4g33990... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e036301_P001 | Zm00001e036301 | Pentatricopeptide repeat-containing protein At4g30700... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e037600_P001 | Zm00001e037600 | Putative pentatricopeptide repeat-containing protein... | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |