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  5. AMTR_s00002p00260500

AMTR_s00002p00260500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.444

Description : DnaJ protein homolog 2 OS=Allium porrum


Gene families : OG0000319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00260500

Target Alias Description ECC score Gene Family Method Actions
Adi_g056581 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081623 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06084 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11958 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37516 No alias co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13460 No alias regulatory protein *(NIMIN1) of Systemic Acquired... 0.02 OrthoFinder output from all 47 species
Aspi01Gene13439.t1 Aspi01Gene13439 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69167.t1 Aspi01Gene69167 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013129 No alias not classified & original description: CDS=410-1486 0.03 OrthoFinder output from all 47 species
Ceric.25G013300.1 Ceric.25G013300 co-chaperone *(Hsp40) & original description:... 0.02 OrthoFinder output from all 47 species
Cre01.g019950 No alias DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Cre10.g420100 No alias DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Dac_g13731 No alias regulatory protein *(NIMIN1) of Systemic Acquired... 0.03 OrthoFinder output from all 47 species
Ehy_g08284 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29119 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008076001 No alias DnaJ protein homolog 1 (Fragment) OS=Allium porrum 0.03 OrthoFinder output from all 47 species
GSVIVT01021112001 No alias DnaJ protein ERDJ3B OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_01704 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_04555 No alias co-chaperone (Hsp40) 0.04 OrthoFinder output from all 47 species
LOC_Os05g48810.1 LOC_Os05g48810 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Len_g00438 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11927 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06865 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07499 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03693 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32909 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo230025 No alias DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Solyc02g077670.3.1 Solyc02g077670 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Solyc11g044450.3.1 Solyc11g044450 DnaJ protein homolog 1 (Fragment) OS=Allium porrum... 0.03 OrthoFinder output from all 47 species
Spa_g13032 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10414 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026521_P002 Zm00001e026521 co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species
Zm00001e032418_P001 Zm00001e032418 co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006915 apoptotic process IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 4 67
IPR002939 DnaJ_C 257 336
No external refs found!