AMTR_s00002p00247340 (NFA03, NFA3, NAP1;3,...)

Aliases : NFA03, NFA3, NAP1;3, evm_27.TU.AmTr_v1.0_scaffold00002.335

Description : Chromatin organisation.histone chaperone activities.NAP-type histone chaperone

Gene families : OG0000784 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000784_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00002p00247340

Target	Alias	Description	ECC score	Gene Family Method
AT4G26110	ATNAP1;1, NAP1;1	nucleosome assembly protein1;1	0.06	OrthoFinder output from all 47 species
Adi_g008944	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g078523	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g102779	NFA02, NFA2, NAP1;2	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g12012	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g13852	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g13959	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0018.g014775	ATNAP1;1, NAP1;1	histone chaperone *(NAP) & original description: CDS=127-1098	0.05	OrthoFinder output from all 47 species
Azfi_s0076.g037821	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: CDS=248-1195	0.02	OrthoFinder output from all 47 species
Cba_g03892	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.23G058600.1	NFA03, NFA3,...	histone chaperone *(NAP) & original description:...	0.04	OrthoFinder output from all 47 species
Ehy_g07547	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os06g05660.1	NFA02, NFA2,...	histone chaperone (NAP)	0.03	OrthoFinder output from all 47 species
Mp6g17990.1	NFA02, NFA2, NAP1;2	histone chaperone (NAP)	0.02	OrthoFinder output from all 47 species
Msp_g07861	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g04480	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g15776	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g07667	No alias	histone chaperone *(NAP) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g35242	No alias	histone chaperone *(NAP) & original description: none	0.04	OrthoFinder output from all 47 species
Smo443393	ATNAP1;1, NAP1;1	Chromatin organisation.histone chaperone...	0.03	OrthoFinder output from all 47 species
Spa_g41321	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g47534	ATNAP1;1, NAP1;1	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g56275	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g27243	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g43616	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e032269_P004	NFA02, NFA2,...	histone chaperone (NAP)	0.05	OrthoFinder output from all 47 species
Zm00001e036497_P001	NFA02, NFA2,...	histone chaperone (NAP)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	Interproscan
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002164	NAP_family	59	303

External Links

No external refs found!

AMTR_s00002p00247340 (NFA03, NFA3, NAP1;3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation