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  5. AMTR_s00002p00241480

AMTR_s00002p00241480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.307

Description : Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana


Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00241480

Target Alias Description ECC score Gene Family Method Actions
Adi_g026166 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15000 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g15309 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24388 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05471 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69296 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72459.t1 Aspi01Gene72459 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044712 No alias UMF23-type solute transporter & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g05895 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09195 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Gb_41715 No alias anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
LOC_Os12g44180.1 LOC_Os12g44180 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Msp_g00648 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32262 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37839 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g40202 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20503 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32537 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36675 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11993 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012235 No alias UMF23-type solute transporter & original description: CDS=48-1715 0.02 OrthoFinder output from all 47 species
Tin_g16333 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32042 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006026_P001 Zm00001e006026 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009113 purine nucleobase biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010658 Nodulin-like 18 263
IPR011701 MFS 342 533
No external refs found!