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  5. AMTR_s00002p00218140

AMTR_s00002p00218140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.232

No description available


Gene families : OG0001299 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00218140

Target Alias Description ECC score Gene Family Method Actions
Als_g12956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000402.9 TMS1, ATERDJ3A DnaJ protein ERDJ3A OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000551.3 No alias No description available 0.01 OrthoFinder output from all 47 species
Pir_g25835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g07403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 10 72
No external refs found!