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  5. AMTR_s00002p00140630

AMTR_s00002p00140630 (CUM2, EIF4G,...)


Aliases : CUM2, EIF4G, evm_27.TU.AmTr_v1.0_scaffold00002.103

Description : Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.eIF4G component


Gene families : OG0001819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00140630

Target Alias Description ECC score Gene Family Method Actions
AT3G60240 CUM2, EIF4G No description available 0.08 OrthoFinder output from all 47 species
Adi_g008243 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g017175 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.07 OrthoFinder output from all 47 species
Adi_g054062 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g067767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077949 CUM2, EIF4G not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g077955 CUM2, EIF4G not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g127086 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g34562 CUM2, EIF4G not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31996 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.02 OrthoFinder output from all 47 species
Als_g29126 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.06 OrthoFinder output from all 47 species
Aob_g02409 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.09 OrthoFinder output from all 47 species
Azfi_s0144.g051554 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0349.g066521 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g37073 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.02 OrthoFinder output from all 47 species
Ceric.10G035100.1 CUM2, EIF4G,... component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.06 OrthoFinder output from all 47 species
Dcu_g20165 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.06 OrthoFinder output from all 47 species
Dde_g35168 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.05 OrthoFinder output from all 47 species
Ehy_g14202 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g20664 CUM2, EIF4G not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018331001 CUM2, EIF4G Eukaryotic translation initiation factor 4G... 0.12 OrthoFinder output from all 47 species
Gb_05240 CUM2, EIF4G component eIF4G of eIF4F mRNA unwinding complex 0.1 OrthoFinder output from all 47 species
LOC_Os07g36940.1 CUM2, EIF4G,... component eIF4G of eIF4F mRNA unwinding complex 0.06 OrthoFinder output from all 47 species
Len_g14799 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.04 OrthoFinder output from all 47 species
Len_g56573 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g10693 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.04 OrthoFinder output from all 47 species
MA_10434326g0020 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_15224g0010 CUM2, EIF4G component eIF4G of eIF4F mRNA unwinding complex 0.06 OrthoFinder output from all 47 species
MA_996855g0010 CUM2, EIF4G Eukaryotic translation initiation factor 4G OS=Triticum... 0.02 OrthoFinder output from all 47 species
Mp7g16900.1 CUM2, EIF4G component eIF4G of eIF4F mRNA unwinding complex 0.03 OrthoFinder output from all 47 species
Msp_g13992 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.05 OrthoFinder output from all 47 species
Ore_g16128 CUM2, EIF4G not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23190 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g43539 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.04 OrthoFinder output from all 47 species
Ppi_g03290 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020804 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.05 OrthoFinder output from all 47 species
Sam_g07947 No alias component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.02 OrthoFinder output from all 47 species
Solyc01g088700.4.1 CUM2, EIF4G,... component eIF4G of eIF4F mRNA unwinding complex 0.07 OrthoFinder output from all 47 species
Spa_g50993 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.04 OrthoFinder output from all 47 species
Tin_g07670 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e010537_P001 CUM2, EIF4G,... component eIF4G of eIF4F mRNA unwinding complex 0.04 OrthoFinder output from all 47 species
Zm00001e035213_P001 CUM2, EIF4G,... component eIF4G of eIF4F mRNA unwinding complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005665 RNA polymerase II, core complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016570 histone modification IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 1800 1911
IPR003890 MIF4G-like_typ-3 1330 1552
No external refs found!