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  5. AMTR_s00001p00271750

AMTR_s00001p00271750


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED15 component


Gene families : OG0001744 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001744_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00271750

Target Alias Description ECC score Gene Family Method Actions
Adi_g019432 No alias component *(MED15) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Adi_g086271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g42341 No alias component *(MED15) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Aspi01Gene18282.t1 Aspi01Gene18282 component *(MED15) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Aspi01Gene20466.t1 Aspi01Gene20466 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g45080.1 LOC_Os08g45080 component MED15 of tail module of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Mp8g02180.1 No alias component MED15 of tail module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Sam_g10032 No alias component *(MED15) of tail module of MEDIATOR... 0.06 OrthoFinder output from all 47 species
Solyc04g009500.4.1 Solyc04g009500 component MED15 of tail module of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Tin_g41519 No alias component *(MED15) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Zm00001e003860_P003 Zm00001e003860 component MED15 of tail module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!