AMTR_s00001p00271680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.494

Description : NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana


Gene families : OG0000261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00271680

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00031790 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00140p00027980 evm_27.TU.AmTr_v1... Uncharacterized protein At1g08160 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00171p00061900 NHL25,... NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G08160 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT1G17620 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT1G65690 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT3G44220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.06 OrthoFinder output from all 47 species
AT5G22870 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Adi_g109010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05231.t2 Aspi01Gene05231 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08814 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20711 NHL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G002200.1 Ceric.29G002200 not classified & original description: pacid=50624873... 0.02 OrthoFinder output from all 47 species
Ceric.29G073800.1 Ceric.29G073800 not classified & original description: pacid=50625140... 0.05 OrthoFinder output from all 47 species
Ceric.30G026900.1 NHL25, Ceric.30G026900 not classified & original description: pacid=50608145... 0.03 OrthoFinder output from all 47 species
Ceric.35G052800.1 Ceric.35G052800 not classified & original description: pacid=50581572... 0.04 OrthoFinder output from all 47 species
Dac_g21080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06112 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09875 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02072 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012622001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01031450001 No alias Uncharacterized protein At1g08160 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00667 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_14222 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g09880.1 LOC_Os01g09880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g39290.1 LOC_Os01g39290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g33550.1 LOC_Os02g33550 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g33990.1 LOC_Os04g33990 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g58090.1 LOC_Os04g58090 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g58860.1 LOC_Os04g58860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g05860.1 LOC_Os11g05860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g00352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g30183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10155182g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10432342g0020 NHL3 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_112233g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_118976g0010 NHL10, YLS9, ATNHL10 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_182952g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_27406g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_390509g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_47856g0010 No alias NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_63890g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_740280g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g19740.1 NHL10, YLS9, ATNHL10 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g07630.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g07369 NHL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32596 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo404356 NHL25 No description available 0.03 OrthoFinder output from all 47 species
Solyc01g007240.3.1 NHL2, Solyc01g007240 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g036480.1.1 NHL25, Solyc02g036480 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g080100.1.1 Solyc02g080100 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc03g081230.1.1 Solyc03g081230 NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc08g065140.1.1 Solyc08g065140 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc10g150145.1.1 NHL1, Solyc10g150145 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g066490.1.1 Solyc11g066490 Uncharacterized protein At1g08160 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc11g069970.1.1 Solyc11g069970 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g22420 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002284_P001 Zm00001e002284 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e006462_P001 Zm00001e006462 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e008171_P001 Zm00001e008171 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e010501_P001 Zm00001e010501 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e039408_P001 Zm00001e039408 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041977_P001 Zm00001e041977 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 75 176
No external refs found!