AMTR_s00001p00271600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.493

Description : NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana


Gene families : OG0000261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00271600

Target Alias Description ECC score Gene Family Method Actions
AT1G08160 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT1G17620 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT1G54540 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
AT1G65690 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT3G44220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT5G22200 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT5G22870 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Aspi01Gene05231.t2 Aspi01Gene05231 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05257.t1 NHL10, YLS9,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05257.t2 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05258.t1 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05258.t2 NHL10, YLS9,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05259.t1 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05260.t1 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05261.t1 NHL10, YLS9,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G017200.1 Ceric.11G017200 not classified & original description: pacid=50596641... 0.04 OrthoFinder output from all 47 species
Ceric.16G075400.1 Ceric.16G075400 not classified & original description: pacid=50589266... 0.03 OrthoFinder output from all 47 species
Ceric.29G073800.1 Ceric.29G073800 not classified & original description: pacid=50625140... 0.03 OrthoFinder output from all 47 species
Dde_g09875 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00667 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_01957 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_14222 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_26587 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_26588 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_41030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g39290.1 LOC_Os01g39290 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g01060.1 LOC_Os02g01060 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g33550.1 LOC_Os02g33550 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g33990.1 LOC_Os04g33990 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g58090.1 LOC_Os04g58090 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g58860.1 LOC_Os04g58860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g01220.1 LOC_Os08g01220 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os10g39970.1 LOC_Os10g39970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g05860.1 LOC_Os11g05860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_313447g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_696598g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_740280g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp8g07630.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g12069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g080100.1.1 Solyc02g080100 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g081230.1.1 Solyc03g081230 NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc11g066490.1.1 Solyc11g066490 Uncharacterized protein At1g08160 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e002284_P001 Zm00001e002284 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e006487_P001 Zm00001e006487 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e008171_P001 Zm00001e008171 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e009221_P001 Zm00001e009221 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e014749_P001 Zm00001e014749 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e025983_P001 Zm00001e025983 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e029112_P001 Zm00001e029112 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e035148_P001 Zm00001e035148 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e040847_P001 Zm00001e040847 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 92 195
No external refs found!