AMTR_s00001p00264010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.396

No description available


Gene families : OG0002957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002957_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00264010

Target Alias Description ECC score Gene Family Method Actions
AT1G52750 No alias alpha/beta-Hydrolases superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G40095 No alias Alpha/beta hydrolase related protein 0.05 OrthoFinder output from all 47 species
Adi_g006381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g01410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04918 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g50629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25033.t1 Aspi01Gene25033 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.25G069600.1 Ceric.25G069600 not classified & original description: pacid=50593946... 0.08 OrthoFinder output from all 47 species
Dde_g01401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032833001 SUE4 No description available 0.04 OrthoFinder output from all 47 species
LOC_Os03g03200.1 LOC_Os03g03200 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g39090.1 SUE4, LOC_Os10g39090 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g15932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_12476g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g16044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35916 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g18724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015993 No alias not classified & original description: CDS=686-1396 0.03 OrthoFinder output from all 47 species
Solyc05g052750.3.1 Solyc05g052750 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Spa_g12042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000176_P001 Zm00001e000176 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e002208_P001 SUE4, Zm00001e002208 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR019498 MENTAL 46 152
No external refs found!