1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00001p00257570

AMTR_s00001p00257570 (IRE1-2, ATIRE1-2,...)


Aliases : IRE1-2, ATIRE1-2, IRE1A, evm_27.TU.AmTr_v1.0_scaffold00001.350

Description : Protein modification.phosphorylation.IRE bifunctional protein kinase and mRNA endoribonuclease


Gene families : OG0002550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002550_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00257570
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT3G11870 No alias Endoribonuclease/protein kinase IRE1-like 0.04 OrthoFinder output from all 47 species
Ceric.20G085200.1 IRE1-2,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ppi_g18203 IRE1-2, ATIRE1-2, IRE1A EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEA Interproscan
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006397 mRNA processing IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003995 acyl-CoA dehydrogenase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006571 tyrosine biosynthetic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
MF GO:0052890 oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010513 KEN_dom 113 236
IPR000719 Prot_kinase_dom 11 106
No external refs found!