AMTR_s00001p00224100 (FLA7,...)


Aliases : FLA7, evm_27.TU.AmTr_v1.0_scaffold00001.234

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.fasciclin-type arabinogalactan protein


Gene families : OG0000997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000997_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00224100

Target Alias Description ECC score Gene Family Method Actions
AT1G03870 FLA9 FASCICLIN-like arabinoogalactan 9 0.03 OrthoFinder output from all 47 species
AT2G04780 FLA7 FASCICLIN-like arabinoogalactan 7 0.04 OrthoFinder output from all 47 species
AT2G20520 FLA6 FASCICLIN-like arabinogalactan 6 0.03 OrthoFinder output from all 47 species
AT5G03170 ATFLA11, FLA11 FASCICLIN-like arabinogalactan-protein 11 0.05 OrthoFinder output from all 47 species
AT5G44130 FLA13 FASCICLIN-like arabinogalactan protein 13 precursor 0.03 OrthoFinder output from all 47 species
AT5G60490 FLA12 FASCICLIN-like arabinogalactan-protein 12 0.06 OrthoFinder output from all 47 species
Adi_g094376 FLA9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g123114 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19811 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13025 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49885 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05102 SOS5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g01638 SOS5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.10G036000.1 Ceric.10G036000 not classified & original description: pacid=50611973... 0.03 OrthoFinder output from all 47 species
Ceric.28G027100.1 ATFLA11, FLA11,... not classified & original description: pacid=50570256... 0.03 OrthoFinder output from all 47 species
Ceric.38G066200.1 SOS5, Ceric.38G066200 not classified & original description: pacid=50580301... 0.03 OrthoFinder output from all 47 species
Dac_g01372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09990 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10854 SOS5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g16387 FLA7 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g17944 FLA13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g42980 No alias Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Ehy_g16212 FLA12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17954 FLA9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025167001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01025660001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01025671001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
LOC_Os02g20540.1 FLA6, LOC_Os02g20540 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os02g20560.1 FLA9, LOC_Os02g20560 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os05g07060.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os05g48890.1 FLA9, LOC_Os05g48890 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os09g30486.1 FLA7, LOC_Os09g30486 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Len_g21109 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10583 FLA12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_309953g0010 FLA7 Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g12777 FLA12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21021 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23143 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05640 No alias Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
Ore_g13961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48472 ATFLA11, FLA11 Fasciclin-type arabinogalactan protein & original... 0.05 OrthoFinder output from all 47 species
Ppi_g10779 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24427 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26588 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60593 SOS5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011051 FLA10 not classified & original description: CDS=1-792 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020398 ATFLA11, FLA11 not classified & original description: CDS=1-771 0.08 OrthoFinder output from all 47 species
Sam_g05188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g075220.1.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc09g007650.3.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g007660.1.1 FLA12, Solyc09g007660 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc11g069250.2.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Spa_g05505 FLA13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07630 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09857 SOS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21452 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49660 SOS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13713 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32690 SOS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010053_P001 FLA7, Zm00001e010053 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e020209_P002 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e024362_P001 FLA7, Zm00001e024362 fasciclin-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Zm00001e026526_P001 FLA9, Zm00001e026526 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e032425_P001 FLA6, Zm00001e032425 Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 56 187
No external refs found!