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  5. AMTR_s00001p00171620

AMTR_s00001p00171620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.160

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycosylation.AGP beta-1,3-galactosyltransferase


Gene families : OG0000384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00171620
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Adi_g011619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01829 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Ala_g13205 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Als_g10414 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G019000.1 Ceric.26G019000 beta-1,3-galactosyltransferase *(B3GALT) & original... 0.04 OrthoFinder output from all 47 species
Dac_g26027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02582 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g20947 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g27809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01037121001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
LOC_Os09g27950.1 LOC_Os09g27950 AGP beta-1,3-galactosyltransferase 0.03 OrthoFinder output from all 47 species
Nbi_g04379 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Pir_g16430 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010181 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Solyc11g042810.2.1 Solyc11g042810 AGP beta-1,3-galactosyltransferase 0.02 OrthoFinder output from all 47 species
Spa_g52541 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Tin_g24594 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA Interproscan
MF GO:0008378 galactosyltransferase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
InterPro domains Description Start Stop
IPR002659 Glyco_trans_31 148 345
IPR025298 DUF4094 16 108
No external refs found!