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  5. Aev_g04134

Aev_g04134


Description : E3 ubiquitin ligase *(RFI2) & original description: none


Gene families : OG0000823 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000823_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g04134

Target Alias Description ECC score Gene Family Method Actions
Aob_g01831 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05218 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g53757 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G065400.1 RFI2, Ceric.19G065400 E3 ubiquitin ligase *(RFI2) & original description:... 0.03 OrthoFinder output from all 47 species
Pnu_g12433 No alias E3 ubiquitin ligase *(RFI2) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 22 68
No external refs found!