- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : RHM1, ROL1, ATRHM1
Description : UDP-L-rhamnose synthase *(RHM) & original description: none
Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aev_g03858 | |
| Cluster | HCCA: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G78570 | RHM1, ROL1, ATRHM1 | rhamnose biosynthesis 1 | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g18717 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g03477 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g25968 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.13G016100.1 | NRS/ER, UER1,... | dTDP-rhamnose synthase *(NRS-ER) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g04561 | NRS/ER, UER1 | dTDP-rhamnose synthase *(NRS-ER) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g13740 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_18288 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase | 0.03 | OrthoFinder output from all 47 species | |
| Len_g15700 | NRS/ER, UER1 | dTDP-rhamnose synthase *(NRS-ER) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g44773 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g23614 | ATRHM3, RHM3 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g56481 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g49046 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025412_P001 | ATRHM2, RHM2,... | Trifunctional UDP-glucose... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038472_P001 | RHM1, ROL1,... | UDP-L-rhamnose synthase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016040 | NAD(P)-bd_dom | 12 | 317 |
| No external refs found! |