LOC_Os08g36700.1

Description : transcription factor (HSF)

Gene families : OG_01_0000090 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000090_tree ,
OG_02_0000053 (LandPlants) Phylogenetic Tree(s): OG_02_0000053_tree ,
OG_03_0000104 (SeedPlants) Phylogenetic Tree(s): OG_03_0000104_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g36700.1
Cluster	HCCA: Cluster_280

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00073p00033500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
AMTR_s00132p00118400	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
AT5G03720	HSFA3, AT-HSFA3	heat shock transcription factor A3	0.03	Archaeplastida
AT5G43840	HSFA6A, AT-HSFA6A	heat shock transcription factor A6A	0.03	Archaeplastida
GSVIVT01011632001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01037333001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
MpVg00470.1	No alias	No annotation	0.03	Archaeplastida
Solyc04g016000.3.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
Solyc04g078770.4.1	No alias	transcription factor (HSF)	0.05	Archaeplastida
Zm00001e034336_P001	No alias	transcription factor (HSF)	0.04	Archaeplastida
Zm00001e035680_P002	No alias	transcription factor (HSF)	0.03	Archaeplastida
AMTR_s00073p00033500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	LandPlants
AMTR_s00132p00118400	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	LandPlants
AT1G46264	HSFB4, SCZ, AT-HSFB4	heat shock transcription factor B4	0.02	LandPlants
AT2G41690	AT-HSFB3, HSFB3	heat shock transcription factor B3	0.03	LandPlants
AT5G43840	HSFA6A, AT-HSFA6A	heat shock transcription factor A6A	0.03	LandPlants
GSVIVT01037333001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	LandPlants
Gb_37236	No alias	transcription factor (HSF)	0.02	LandPlants
MpVg00470.1	No alias	No annotation	0.03	LandPlants
Solyc04g016000.3.1	No alias	transcription factor (HSF)	0.02	LandPlants
Solyc04g078770.4.1	No alias	transcription factor (HSF)	0.05	LandPlants
Zm00001e034336_P001	No alias	transcription factor (HSF)	0.04	LandPlants
Zm00001e035680_P002	No alias	transcription factor (HSF)	0.02	LandPlants
AMTR_s00073p00033500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	SeedPlants
AMTR_s00095p00016160	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	SeedPlants
AMTR_s00132p00118400	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	SeedPlants
AT2G41690	AT-HSFB3, HSFB3	heat shock transcription factor B3	0.03	SeedPlants
GSVIVT01037333001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	SeedPlants
Gb_37236	No alias	transcription factor (HSF)	0.02	SeedPlants
MA_8845456g0010	No alias	transcription factor (HSF)	0.01	SeedPlants
Solyc02g090820.3.1	No alias	transcription factor (HSF)	0.02	SeedPlants
Solyc04g078770.4.1	No alias	transcription factor (HSF)	0.05	SeedPlants
Zm00001e034336_P001	No alias	transcription factor (HSF)	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	26	120

External Links

No external refs found!

LOC_Os08g36700.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation