Dac_g45677 (PAPS2)

Aliases : PAPS2

Description : poly(A) RNA polymerase & original description: none

Gene families : OG0000731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000731_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g45677

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00000037.23	PAPS1	RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase	0.02	OrthoFinder output from all 47 species
Pir_g13408	PAP(IV), nPAP	poly(A) RNA polymerase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043631	RNA polyadenylation	IEA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007012	PolA_pol_cen_dom	11	200
IPR007010	PolA_pol_RNA-bd_dom	203	256
IPR007010	PolA_pol_RNA-bd_dom	261	329

External Links

No external refs found!