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  5. Dac_g44940

Dac_g44940 (MAG2)


Aliases : MAG2

Description : component *(MAG2) of DSL1 (Depends-on-SLY1) complex & original description: none


Gene families : OG0006233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g44940

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00255200 MAG2,... Vesicle trafficking.target membrane tethering.DSL1... 0.02 OrthoFinder output from all 47 species
AT1G08400 No alias RINT-1 / TIP-1 family 0.02 OrthoFinder output from all 47 species
Pir_g15743 MAG2 component *(MAG2) of DSL1 (Depends-on-SLY1) complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020836 MAG2 component *(MAG2) of DSL1 (Depends-on-SLY1) complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA Interproscan
CC GO:0070939 Dsl1/NZR complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0045273 respiratory chain complex II IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR007528 RINT1_Tip20 320 853
No external refs found!