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  5. Dac_g44140

Dac_g44140 (ASK1, ATSKP1, UIP1,...)


Aliases : ASK1, ATSKP1, UIP1, SKP1, SKP1A

Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes & original description: none


Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g44140

Target Alias Description ECC score Gene Family Method Actions
AT5G42190 ASK2, SKP1B E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein 0.03 OrthoFinder output from all 47 species
Adi_g042162 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cba_g11970 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cba_g46809 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g03646 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Spa_g07351 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g25527 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g30158 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g51070 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Zm00001e021478_P001 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005471 ATP:ADP antiporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 159 206
IPR016073 Skp1_comp_POZ 54 111
No external refs found!