Zm00001d018102 (GRMZM2G059958)


Aliases : GRMZM2G059958

Description : 26.7 misc.oxidases - copper, flavone etc Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation. LSD1-like 1 (LDL1)


Gene families : OG_01_0000705 (Gene family) Phylogenetic Tree(s): OG0000705_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d018102
Cluster HCCA cluster: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
Cre07.g318651 No alias 26.7 misc.oxidases - copper, flavone etc Encodes a plant... 0.02 Gene family
GSVIVT01014417001 No alias 26.7 misc.oxidases - copper, flavone etc Encodes a... 0.03 Gene family
LOC_Os08g04780 Os08g0143400 26.7 misc.oxidases - copper, flavone etc Encodes a... 0.03 Gene family
Smo79938 PACid_15405909 No description available 0.03 Gene family
Solyc11g008320.2.1 Solyc11g008320.2 26.7 misc.oxidases - copper, flavone etc Encodes a plant... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002937 Amino_oxidase 273 706
IPR007526 SWIRM 167 244
No external refs found!