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  5. Dac_g42728

Dac_g42728 (FSD2)


Aliases : FSD2

Description : iron superoxide dismutase *(FSD) & original description: none


Gene families : OG0002805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002805_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g42728
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT5G23310 FSD3 Fe superoxide dismutase 3 0.02 OrthoFinder output from all 47 species
AT5G51100 FSD2 Fe superoxide dismutase 2 0.05 OrthoFinder output from all 47 species
Azfi_s0358.g066808 FSD2 iron superoxide dismutase *(FSD) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g77404 FSD2 iron superoxide dismutase *(FSD) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013850001 FSD2 RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
MA_864356g0010 FSD3 Superoxide dismutase [Fe] 3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Pir_g04876 FSD2 cofactor of plastid-encoded RNA polymerase *(PAP9/FSD2)... 0.04 OrthoFinder output from all 47 species
Zm00001e029984_P001 FSD3, Zm00001e029984 iron superoxide dismutase. PAP4/FSD3 cofactor of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0017007 protein-bilin linkage IEP HCCA
BP GO:0017009 protein-phycocyanobilin linkage IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR019831 Mn/Fe_SOD_N 48 131
IPR019832 Mn/Fe_SOD_C 139 249
No external refs found!